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          • › Search Tool
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          • › Rn00596047_m1
          See other APTX GE Assays ›
          Gene Symbol:
          Aptx
          Gene Name:
          aprataxin
          Gene Aliases:
          -
          Chromosome Location:
          Chr.5: 56987714 - 57009442 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00596047_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 2,694.00
          Your Price
          Online offer:
          2694.0
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Aptx
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_148889.2 NP_683687.1 5 - 6 777 120
          XM_006238026.2 XP_006238088.1 5 - 6 1133 120
          XM_006238027.2 XP_006238089.1 4 - 5 1169 120
          XM_006238028.2 XP_006238090.1 4 - 5 1016 120
          XM_006238029.2 XP_006238091.1 3 - 4 350 120
          XM_008763607.1 XP_008761829.1 3 - 4 1028 120
          GenBank mRNA AF398235.1 - 4 - 5 523 120
          BC078716.1 - 5 - 6 777 7132044 120
          FQ214915.1 - 1 - 2 150 120

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0500002554.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Aptx

          Panther Classification:

          Molecular Function -

          damaged DNA-binding protein

          Gene Ontology Categories:

          Function(s) Process(es)

          single strand break repair
          DNA catabolic process, exonucleolytic
          DNA ligation
          double-strand break repair
          cellular response to DNA damage stimulus
          biological_process
          dephosphorylation
          regulation of protein stability
          response to hydrogen peroxide
          polynucleotide 3' dephosphorylation
          molecular_function
          chromatin binding
          damaged DNA binding
          double-stranded DNA binding
          double-stranded RNA binding
          phosphoglycolate phosphatase activity
          DNA 5'-adenosine monophosphate hydrolase activity
          polynucleotide 3'-phosphatase activity
          metal ion binding
          protein N-terminus binding
          phosphoprotein binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P184553 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 556228 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 789853 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 84803 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 881519 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 209328 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 99984 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 142217 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 950986 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 183544 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 101063 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 367059 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 950810 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 671541 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 59903 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 203184 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 90876 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 134403 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 131222 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 118456 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P184553 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P184553 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P184553 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P184553 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 18009 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 10965 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 96277 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 102107 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10876026 - -
          Affymetrix Rat Gene 1.0 ST Array 10876029 - -
          Affymetrix Rat Gene 1.0 ST Array 10876030 - -
          Affymetrix Rat Gene 1.0 ST Array 10876024 - -
          Affymetrix Rat Gene 1.0 ST Array 10876028 - -
          Affymetrix Rat Gene 1.0 ST Array 10876027 - -
          Affymetrix Rat Gene 1.0 ST Array 10876025 - -
          Affymetrix Rat Gene 1.0 ST Array 10876031 - -
          Affymetrix Rat Gene 1.0 ST Array 10876023 - -
          Affymetrix Rat Gene 1.1 ST Array 10876022 - -
          Rat Genome 230 2.0 Array 1376900_at - -
          Rat Genome 230 2.0 Array 1376900_PM_at - -
          Affymetrix HT Rat Focus Array 1376900_PM_at - -
          Affymetrix HT Rat Focus Array 1376900_at - -
          Affymetrix Rat Clariom S Assay PSR0500018736.rn.1 TC0500002554.rn.1 RTA TC
          Rat Expression Set 230 1376900_PM_at - -
          Rat Expression Set 230 1376900_at - -
          Affymetrix Rat Gene 1.0 ST Array 10876022 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21660158 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1369321 - -
          RatRef-12 Expression BeadChip ILMN_67803 - -

          Back To Top

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