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- Gene Symbol:
-
Dnmt1 - Gene Name:
- DNA (cytosine-5-)-methyltransferase 1
- Gene Aliases:
- -
- Chromosome Location:
- Chr.8: 21922515 - 21968495 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Dnmt1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_053354.3 | NP_445806.3 | 5 - 6 | 592 | 62 | |
| GenBank mRNA | AB012214.1 | - | 5 - 6 | 576 | 62 | |
| D64060.1 | - | 5 - 6 | 464 | 62 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0800002054.rn.1Set Membership: |
Ambion siRNA available
Amplicon length less than or equal to 70
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription from RNA polymerase II promoter
DNA methylation
transcription, DNA-templated
regulation of transcription, DNA-templated
brain development
aging
response to heat
response to toxic substance
response to organic substance
response to ionizing radiation
maintenance of DNA methylation
response to lead ion
DNA methylation on cytosine within a CG sequence
regulation of gene expression
positive regulation of gene expression
response to activity
gene silencing
chromatin modification
neuron differentiation
response to caffeine
response to nutrient levels
response to estradiol
response to lipopolysaccharide
DNA methylation on cytosine
response to vitamin A
response to testosterone
cellular response to platelet-derived growth factor stimulus
response to antidepressant
regulation of cell proliferation
response to drug
DNA hypermethylation
response to ethanol
negative regulation of transcription, DNA-templated
S-adenosylhomocysteine metabolic process
S-adenosylmethioninamine metabolic process
S-adenosylmethionine metabolic process
positive regulation of histone H3-K4 methylation
negative regulation of histone H3-K9 methylation
cellular response to amino acid stimulus
cellular response to lead ion
cellular response to transforming growth factor beta stimulus
C-5 methylation of cytosine
cellular response to nerve growth factor stimulus
DNA binding
chromatin binding
double-stranded DNA binding
RNA binding
DNA (cytosine-5-)-methyltransferase activity
protein binding
transcription factor binding
methyltransferase activity
zinc ion binding
methyl-CpG binding
S-adenosylmethionine-dependent methyltransferase activity
DNA-methyltransferase activity
protein domain specific binding
estrogen receptor binding
histone deacetylase binding
unmethylated CpG binding
DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates
negative regulation of transcription from RNA polymerase II promoter
DNA methylation
transcription, DNA-templated
regulation of transcription, DNA-templated
brain development
aging
response to heat
response to toxic substance
response to organic substance
response to ionizing radiation
maintenance of DNA methylation
response to lead ion
DNA methylation on cytosine within a CG sequence
regulation of gene expression
positive regulation of gene expression
response to activity
gene silencing
chromatin modification
neuron differentiation
response to caffeine
response to nutrient levels
response to estradiol
response to lipopolysaccharide
DNA methylation on cytosine
response to vitamin A
response to testosterone
cellular response to platelet-derived growth factor stimulus
response to antidepressant
regulation of cell proliferation
response to drug
DNA hypermethylation
response to ethanol
negative regulation of transcription, DNA-templated
S-adenosylhomocysteine metabolic process
S-adenosylmethioninamine metabolic process
S-adenosylmethionine metabolic process
positive regulation of histone H3-K4 methylation
negative regulation of histone H3-K9 methylation
cellular response to amino acid stimulus
cellular response to lead ion
cellular response to transforming growth factor beta stimulus
C-5 methylation of cytosine
cellular response to nerve growth factor stimulus
DNA binding
chromatin binding
double-stranded DNA binding
RNA binding
DNA (cytosine-5-)-methyltransferase activity
protein binding
transcription factor binding
methyltransferase activity
zinc ion binding
methyl-CpG binding
S-adenosylmethionine-dependent methyltransferase activity
DNA-methyltransferase activity
protein domain specific binding
estrogen receptor binding
histone deacetylase binding
unmethylated CpG binding
DNA (cytosine-5-)-methyltransferase activity, acting on CpG substrates
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P052680 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 597034 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 574987 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 47059 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 930631 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 501904 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 934574 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 288538 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 507605 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 779767 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 471876 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 965581 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 800568 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 154242 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 69199 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 454216 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 353327 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 49818 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 973490 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 327037 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 388721 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 582873 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 671199 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 366015 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 594453 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 556960 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 513926 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 949621 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 750129 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 938289 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 927565 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 642719 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 466814 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 541230 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 893162 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 1531 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 738453 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 75256 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 24634 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 93439 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 157151 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 69529 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 7855 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P052680 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P052680 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P052680 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P388853 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P125681 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700883582 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 702569949 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 74210 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 88710 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 32962 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 95892 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 702569949 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700883582 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10915456 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915471 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915442 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915458 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915443 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915474 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915445 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915466 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915451 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915441 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915453 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915438 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915461 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915460 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915439 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915469 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915440 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915465 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915448 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915467 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915454 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915444 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915464 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915473 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915455 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915450 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915459 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915449 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915463 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915452 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915470 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915475 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915457 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915476 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915472 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915446 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915468 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10915437 | - | - |
| Rat Genome 230 2.0 Array | 1373772_at | - | - |
| Rat Genome 230 2.0 Array | 1373772_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1373772_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1373772_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0800016466.rn.1 | TC0800002054.rn.1 | RTA TC |
| Rat Expression Set 230 | 1373772_PM_at | - | - |
| Rat Expression Set 230 | 1373772_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10915437 | - | - |
| Rat Genome U34 Set | AB012214_s_at | - | - |
| Rat Genome U34 Set | D64060_s_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 22220177 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1350922 | - | - |
| RatRef-12 Expression BeadChip | ILMN_50839 | - | - |
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