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          • Home
          • › Search Tool
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          • › Rn01325256_m1
          See other PER1 GE Assays ›
          Gene Symbol:
          Per1
          Gene Name:
          period circadian clock 1
          Gene Aliases:
          rper1
          Chromosome Location:
          Chr.10: 55681734 - 55696557 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01325256_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 2,694.00
          Your Price
          Online offer:
          2694.0
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Per1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001034125.1 NP_001029297.1 16 - 17 2269 62
          XM_006246613.2 XP_006246675.1 17 - 18 2516 62
          XM_006246614.2 XP_006246676.1 17 - 18 6166 62
          GenBank mRNA AB092976.1 - 16 - 17 2212 62
          AY903228.1 - 16 - 17 2269 62
          AY903229.1 - 16 - 17 2269 62
          AY903230.1 - 16 - 17 2278 62

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1000000908.rn.1

          Set Membership:

          Amplicon length less than or equal to 70 Detect Genomic DNA Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Panther Classification:

          Molecular Function -

          transcription cofactor gene-specific transcriptional regulator

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          regulation of sodium ion transport
          transcription, DNA-templated
          signal transduction
          circadian rhythm
          posttranscriptional regulation of gene expression
          circadian regulation of gene expression
          regulation of hair cycle
          regulation of circadian rhythm
          negative regulation of I-kappaB kinase/NF-kappaB signaling
          entrainment of circadian clock by photoperiod
          histone H3 acetylation
          histone H4 acetylation
          negative regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          negative regulation of JNK cascade
          response to cAMP
          histone H3 deacetylation
          circadian regulation of translation
          regulation of cytokine production involved in inflammatory response
          regulation of p38MAPK cascade
          negative regulation of glucocorticoid receptor signaling pathway
          transcription regulatory region sequence-specific DNA binding
          RNA polymerase II core promoter proximal region sequence-specific DNA binding
          transcription factor activity, transcription factor binding
          signal transducer activity
          protein binding
          transcription factor binding
          kinase binding
          chromatin DNA binding
          ubiquitin protein ligase binding
          E-box binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR1000007786.rn.1 TC1000000908.rn.1 RTA TC

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