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- Gene Symbol:
-
Trip12 - Gene Name:
- thyroid hormone receptor interactor 12
- Gene Aliases:
- Gtl6, TRIP-12
- Chromosome Location:
- Chr.9: 92305059 - 92435388 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Trip12 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001031659.1 | NP_001026829.1 | 38 - 39 | 5563 | 120 | |
| XM_006245377.2 | XP_006245439.1 | 38 - 39 | 5819 | 120 | ||
| XM_006245379.2 | XP_006245441.1 | 38 - 39 | 5816 | 120 | ||
| XM_006245380.2 | XP_006245442.1 | 38 - 39 | 5804 | 120 | ||
| XM_006245386.1 | XP_006245448.1 | 37 - 38 | 5735 | 120 | ||
| XM_008767252.1 | XP_008765474.1 | 38 - 39 | 5828 | 120 | ||
| XM_008767253.1 | XP_008765475.1 | 38 - 39 | 5879 | 120 | ||
| XM_008767254.1 | XP_008765476.1 | 38 - 39 | 5825 | 120 | ||
| XM_008767255.1 | XP_008765477.1 | 38 - 39 | 5813 | 120 | ||
| XM_008767256.1 | XP_008765478.1 | 39 - 40 | 5741 | 120 | ||
| XM_008767257.1 | XP_008765479.1 | 37 - 38 | 5747 | 120 | ||
| GenBank mRNA | BC088304.1 | - | 7 - 8 | 874 | 120 | |
| BC100624.1 | - | 38 - 39 | 5563 | 7930421 | 120 | |
| BC105889.1 | - | 8 - 9 | 1149 | 120 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0900002369.rn.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
DNA repair
cellular response to DNA damage stimulus
protein ubiquitination
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
negative regulation of histone H2A K63-linked ubiquitination
negative regulation of double-strand break repair
ubiquitin-protein transferase activity
zinc ion binding
ligase activity
thyroid hormone receptor binding
DNA repair
cellular response to DNA damage stimulus
protein ubiquitination
protein ubiquitination involved in ubiquitin-dependent protein catabolic process
negative regulation of histone H2A K63-linked ubiquitination
negative regulation of double-strand break repair
ubiquitin-protein transferase activity
zinc ion binding
ligase activity
thyroid hormone receptor binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_43_P21178 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P020571 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 503473 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 680570 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 639435 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 274496 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 770572 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 757195 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 152373 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 897326 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 784518 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 649207 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 960816 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 81970 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 242160 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 557798 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 597664 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 393220 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 650418 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 922139 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 76002 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 376409 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 67741 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 592224 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 803455 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 82714 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 189655 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 895223 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 529822 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 2944 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 280561 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 155929 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 973867 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 824594 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 871877 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 956392 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 683814 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 235566 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 640851 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 184600 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 805959 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 686255 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 582648 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 272649 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 858106 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 956988 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 407990 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 796256 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 556593 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 899732 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583597 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 64433 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 911430 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 712683 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 567613 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 444882 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 677679 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 402733 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 221887 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 805699 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 350051 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 248113 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 565622 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 385756 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 837897 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 807134 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 571638 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 402155 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 156877 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 942619 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 947746 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 675127 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 539634 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 816129 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 770550 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 612371 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 298110 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 545499 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 72317 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 907832 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 113280 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 640613 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 509091 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 706166 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 89920 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 558767 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 867239 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 173177 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 332528 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 635619 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 336651 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 6813 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 154385 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 21260 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 119069 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 73762 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 85799 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 31735 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 95394 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 123968 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 175046 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 7157 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 96488 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 25609 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 102292 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 35283 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P21178 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P020571 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P020571 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P21178 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_43_P21178 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P020571 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_43_P21178 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 44378 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 102773 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 71219 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 45349 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 48256 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 89643 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 13124 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 36853 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10929510 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929524 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929525 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929526 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929499 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929495 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929494 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929505 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929502 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929493 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929496 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929527 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929504 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929535 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929529 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929509 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929514 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929519 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929534 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929518 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929528 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929521 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929500 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929532 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929520 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929492 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929511 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929516 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929523 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929501 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929531 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929497 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929515 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929506 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929530 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929508 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929513 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929512 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929517 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929522 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929503 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929498 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10929491 | - | - |
| Rat Genome 230 2.0 Array | 1388873_at | - | - |
| Rat Genome 230 2.0 Array | 1376984_at | - | - |
| Rat Genome 230 2.0 Array | 1374490_at | - | - |
| Rat Genome 230 2.0 Array | 1374490_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1376984_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1388873_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1374490_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1388873_at | - | - |
| Affymetrix HT Rat Focus Array | 1388873_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1374490_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0900019422.rn.1 | TC0900002369.rn.1 | RTA TC |
| Rat Expression Set 230 | 1388873_PM_at | - | - |
| Rat Expression Set 230 | 1388873_at | - | - |
| Rat Expression Set 230 | 1374490_PM_at | - | - |
| Rat Expression Set 230 | 1374490_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10929491 | - | - |
| Rat Genome U34 Set | rc_AI177845_at | - | - |
| Rat Genome U34 Set | rc_AI178968_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21990948 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1353794 | - | - |
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