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          • Home
          • › Search Tool
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          • › Rn01402000_m1
          See other WNT5A GE Assays ›
          Gene Symbol:
          Wnt5a
          Gene Name:
          wingless-type MMTV integration site family, member 5A
          Gene Aliases:
          -
          Chromosome Location:
          Chr.16: 4469451 - 4488707 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01402000_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
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          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Wnt5a
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_022631.1 NP_072153.1 4 - 5 917 66
          XM_006252664.2 XP_006252726.1 4 - 5 787 66
          XM_006252665.2 XP_006252727.1 4 - 5 749 66
          XM_008771007.1 XP_008769229.1 4 - 5 1625 66
          GenBank mRNA AB244721.1 - 3 - 4 683 66
          AF188333.1 - 4 - 5 917 66
          AY819646.1 - 3 - 4 683 66

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1600000059.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Wnt5a

          Panther Classification:

          Molecular Function -

          intercellular signal molecule

          Gene Ontology Categories:

          Function(s) Process(es)

          activation of MAPK activity
          ameboidal-type cell migration
          establishment of planar polarity
          somitogenesis
          positive regulation of cytokine production
          epithelial to mesenchymal transition
          neural tube closure
          positive regulation of protein phosphorylation
          positive regulation of endothelial cell proliferation
          heart looping
          morphogenesis of an epithelium
          positive regulation of mesenchymal cell proliferation
          positive regulation of cytokine secretion involved in immune response
          type B pancreatic cell development
          pericardium morphogenesis
          axis elongation
          protein phosphorylation
          Wnt signaling pathway, calcium modulating pathway
          JNK cascade
          activation of JUN kinase activity
          determination of left/right symmetry
          axon guidance
          hindgut morphogenesis
          midgut development
          positive regulation of cell proliferation
          male gonad development
          anterior/posterior axis specification, embryo
          anterior/posterior pattern specification
          response to organic substance
          positive regulation of endothelial cell migration
          positive regulation of peptidyl-threonine phosphorylation
          positive regulation of T cell chemotaxis
          positive regulation of neuron projection development
          response to organic cyclic compound
          Wnt signaling pathway
          cell migration
          olfactory bulb interneuron development
          neural tube development
          positive regulation of cell-cell adhesion
          cell differentiation
          neuron differentiation
          keratinocyte differentiation
          lung development
          embryonic limb morphogenesis
          negative regulation of BMP signaling pathway
          positive regulation of cGMP metabolic process
          prostate gland development
          activation of protein kinase B activity
          response to estradiol
          positive regulation of interferon-gamma production
          positive regulation of interleukin-6 production
          regulation of protein localization
          positive regulation of peptidyl-serine phosphorylation
          response to testosterone
          cellular protein localization
          limb morphogenesis
          non-canonical Wnt signaling pathway
          post-anal tail morphogenesis
          non-canonical Wnt signaling pathway via JNK cascade
          negative regulation of fibroblast growth factor receptor signaling pathway
          wound healing
          inner ear morphogenesis
          embryonic digit morphogenesis
          positive regulation of macrophage activation
          negative regulation of apoptotic process
          positive regulation of JUN kinase activity
          estrous cycle
          positive regulation of chemokine biosynthetic process
          cell fate commitment
          negative regulation of fat cell differentiation
          positive regulation of protein catabolic process
          positive regulation of angiogenesis
          positive regulation of ossification
          positive regulation of endocytosis
          positive regulation of meiotic nuclear division
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          positive regulation of JNK cascade
          development of primary male sexual characteristics
          positive regulation of fibroblast proliferation
          lung alveolus development
          digestive tract morphogenesis
          embryonic skeletal system development
          genitalia development
          neuron projection morphogenesis
          negative regulation of axon extension involved in axon guidance
          hypophysis morphogenesis
          positive regulation of epithelial cell proliferation
          negative regulation of epithelial cell proliferation
          positive regulation of interleukin-1 beta secretion
          positive regulation of inflammatory response
          negative chemotaxis
          positive regulation of NF-kappaB transcription factor activity
          cartilage development
          response to glucocorticoid
          negative regulation of synapse assembly
          response to hyperoxia
          palate development
          convergent extension
          convergent extension involved in organogenesis
          uterus development
          cervix development
          vagina development
          canonical Wnt signaling pathway
          Wnt signaling pathway, planar cell polarity pathway
          urinary bladder development
          face development
          positive regulation of type I interferon-mediated signaling pathway
          lateral sprouting involved in mammary gland duct morphogenesis
          tube closure
          mesenchymal-epithelial cell signaling
          negative regulation of prostatic bud formation
          mammary gland branching involved in thelarche
          epithelial cell proliferation involved in mammary gland duct elongation
          positive regulation of response to cytokine stimulus
          regulation of branching involved in mammary gland duct morphogenesis
          positive regulation of macrophage cytokine production
          positive regulation of cartilage development
          planar cell polarity pathway involved in outflow tract morphogenesis
          planar cell polarity pathway involved in ventricular septum morphogenesis
          planar cell polarity pathway involved in cardiac right atrium morphogenesis
          planar cell polarity pathway involved in cardiac muscle tissue morphogenesis
          planar cell polarity pathway involved in pericardium morphogenesis
          positive regulation of thymocyte apoptotic process
          cellular response to molecule of bacterial origin
          cellular response to lipopolysaccharide
          cellular response to calcium ion
          cellular response to interferon-gamma
          hematopoietic stem cell proliferation
          dopaminergic neuron differentiation
          cellular response to transforming growth factor beta stimulus
          negative regulation of mesenchymal cell proliferation
          primitive streak formation
          positive regulation of protein kinase C signaling
          negative regulation of canonical Wnt signaling pathway
          cochlea morphogenesis
          planar cell polarity pathway involved in neural tube closure
          positive regulation of cell-cell adhesion mediated by cadherin
          positive regulation of interleukin-8 secretion
          molecular_function
          transcription factor activity, sequence-specific DNA binding
          receptor binding
          frizzled binding
          frizzled-2 binding
          receptor tyrosine kinase-like orphan receptor binding
          cytokine activity
          protein domain specific binding
          transcription regulatory region DNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P481160 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 972277 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 706911 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 932641 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 370026 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 923874 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 743786 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 701872 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 918152 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 874963 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 344221 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 485369 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 309063 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 95851 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 21725 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 140449 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P481160 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P481160 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P481160 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P481160 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 4110 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 96917 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10786402 - -
          Affymetrix Rat Gene 1.0 ST Array 10786406 - -
          Affymetrix Rat Gene 1.0 ST Array 10786407 - -
          Affymetrix Rat Gene 1.0 ST Array 10786403 - -
          Affymetrix Rat Gene 1.0 ST Array 10786405 - -
          Affymetrix Rat Gene 1.0 ST Array 10786404 - -
          Affymetrix Rat Gene 1.1 ST Array 10786401 - -
          Rat Genome 230 2.0 Array 1369263_PM_at - -
          Rat Genome 230 2.0 Array 1369263_at - -
          Affymetrix HT Rat Focus Array 1369263_at - -
          Affymetrix HT Rat Focus Array 1369263_PM_at - -
          Affymetrix Rat Clariom S Assay PSR1600000538.rn.1 TC1600000059.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600000537.rn.1 TC1600000059.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600000536.rn.1 TC1600000059.rn.1 RTA TC
          Rat Expression Set 230 1369263_PM_at - -
          Rat Expression Set 230 1369263_at - -
          Affymetrix Rat Gene 1.0 ST Array 10786401 - -
          Rat Genome U34 Set rc_AI231627_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21767524 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1356340 - -
          RatRef-12 Expression BeadChip ILMN_57730 - -

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