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- Gene Symbol:
-
Usp3 - Gene Name:
- ubiquitin specific peptidase 3
- Gene Aliases:
- -
- Chromosome Location:
- Chr.8: 72207970 - 72284871 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Usp3 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001025424.1 | NP_001020595.1 | 4 - 5 | 484 | 146 | |
| GenBank mRNA | BC129075.1 | - | 4 - 5 | 458 | 7383067 | 146 |
| DQ076481.1 | - | 4 - 5 | 484 | 146 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0800002796.rn.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
Protease
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription from RNA polymerase II promoter
mitotic cell cycle
DNA repair
histone deubiquitination
regulation of protein stability
proteasome-mediated ubiquitin-dependent protein catabolic process
regulation of proteasomal protein catabolic process
core promoter sequence-specific DNA binding
chromatin binding
cysteine-type endopeptidase activity
thiol-dependent ubiquitin-specific protease activity
histone binding
negative regulation of transcription from RNA polymerase II promoter
mitotic cell cycle
DNA repair
histone deubiquitination
regulation of protein stability
proteasome-mediated ubiquitin-dependent protein catabolic process
regulation of proteasomal protein catabolic process
core promoter sequence-specific DNA binding
chromatin binding
cysteine-type endopeptidase activity
thiol-dependent ubiquitin-specific protease activity
histone binding
MicroArray Probes:
Agilent
Affymetrix
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P544552 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 858757 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 437633 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 133822 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 390341 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 326678 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 321698 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 221525 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 897774 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 158189 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 704426 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 729731 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 667241 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 801255 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 930699 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 823572 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 874952 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 179768 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 117281 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 695083 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 2926 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 312407 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 688280 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 861436 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 89649 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 690545 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 276180 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 798728 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 544533 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 643318 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 766206 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 603900 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 643489 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 30959 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 166772 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 905740 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 557765 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 908054 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 68570 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 801109 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 375322 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 808663 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 354801 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 325921 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 607029 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 152550 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 46606 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 579485 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 349804 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 390280 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 172873 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 859044 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 323574 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 67503 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 116272 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 150487 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 158695 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 53310 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 119818 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 11301 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 70157 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 80083 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 85137 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 11062 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P544552 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P544552 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P544552 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P544552 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 12004 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 20241 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 15298 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 29880 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 85463 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 8812 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 60883 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10918356 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918357 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918349 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918360 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918351 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918358 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918355 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918348 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918352 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918359 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918353 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918350 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918361 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918354 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918347 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918346 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10918345 | - | - |
| Rat Genome 230 2.0 Array | 1389091_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1389091_at | - | - |
| Affymetrix HT Rat Focus Array | 1389091_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1389091_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0800022734.rn.1 | TC0800002796.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0800022733.rn.1 | TC0800002796.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0800022732.rn.1 | TC0800002796.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0800022730.rn.1 | TC0800002796.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0800022731.rn.1 | TC0800002796.rn.1 | RTA TC |
| Rat Expression Set 230 | 1389091_PM_at | - | - |
| Rat Expression Set 230 | 1389091_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10918345 | - | - |
| Rat Genome U34 Set | rc_AA956794_at | - | - |
| Rat Genome U34 Set | rc_AA925744_at | - | - |
| Rat Genome U34 Set | rc_AA925744_g_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1363053 | - | - |
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1357920 | - | - |
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