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          • Home
          • › Search Tool
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          • › Rn01424725_m1
          See other CIITA GE Assays ›
          Gene Symbol:
          Ciita
          Gene Name:
          class II, major histocompatibility complex, transactivator
          Gene Aliases:
          C2ta, Mhc2ta
          Chromosome Location:
          Chr.10: 5213107 - 5260650 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01424725_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ciita
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001270803.1 NP_001257732.1 9 - 10 951 64
          NM_001270804.1 NP_001257733.1 9 - 10 879 64
          NM_053529.2 NP_445981.2 9 - 10 1170 64
          XM_006245738.2 XP_006245800.1 9 - 10 1212 64
          XM_008767501.1 XP_008765723.1 10 - 11 2252 64
          GenBank mRNA AF251305.1 - 9 - 10 1170 64
          AF251306.1 - 9 - 10 951 64
          AF251307.1 - 9 - 10 879 64

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1000002212.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Ciita

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          inflammatory response
          aging
          response to interferon-gamma
          positive regulation of MHC class I biosynthetic process
          positive regulation of MHC class II biosynthetic process
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          response to antibiotic
          cellular response to electrical stimulus
          cellular response to interferon-gamma
          cellular response to exogenous dsRNA
          molecular_function
          ATP binding
          protein C-terminus binding
          protein complex binding
          activating transcription factor binding
          transcription regulatory region DNA binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR1000019895.rn.1 TC1000002212.rn.1 RTA TC

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