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          • Home
          • › Search Tool
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          • › Rn01429393_g1
          See other HMGA1 GE Assays ›
          Gene Symbol:
          Hmga1
          Gene Name:
          high mobility group AT-hook 1
          Gene Aliases:
          Hmgi, Hmgiy
          Chromosome Location:
          Chr.20: 7132490 - 7140155 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01429393_g1
          Best Coverage
          Size
          Availability Made To Order
          Catalog # 4351372
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Hmga1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_139327.1 NP_647543.1 2 - 3 219 66
          XM_006256156.1 XP_006256218.1 3 - 4 366 66
          XM_006256157.2 XP_006256219.1 4 - 5 479 66
          XM_006256158.2 XP_006256220.1 3 - 4 408 66
          XM_006256161.1 XP_006256223.1 3 - 4 333 66
          XM_006256162.2 XP_006256224.1 3 - 4 369 66
          XM_006256163.2 XP_006256225.1 3 - 4 744 66
          GenBank mRNA AF507966.1 - 2 - 3 219 66
          AF511040.1 - 2 - 3 206 66

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          More Information


          Additional Information:

          Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Detect Genomic DNA Recommended Assay Rattus norvegicus Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Hmga1

          Panther Classification:

          Molecular Function -

          endodeoxyribonuclease

          Gene Ontology Categories:

          Function(s) Process(es)

          DNA catabolic process, endonucleolytic
          base-excision repair
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          transcription from RNA polymerase II promoter
          spermatogenesis
          negative regulation of cell proliferation
          response to virus
          senescence-associated heterochromatin focus assembly
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          oncogene-induced cell senescence
          positive regulation of cellular senescence
          transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
          DNA binding
          transcription factor activity, sequence-specific DNA binding
          DNA-(apurinic or apyrimidinic site) lyase activity
          transcription factor binding
          enzyme binding
          ligand-dependent nuclear receptor transcription coactivator activity
          retinoic acid receptor binding
          peroxisome proliferator activated receptor binding
          retinoid X receptor binding
          5'-deoxyribose-5-phosphate lyase activity

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR2000002679.rn.1 TC2000000292.rn.1 RTA TC

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