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          • Home
          • › Search Tool
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          • › Rn01436539_m1
          See other NCBP1 GE Assays ›
          Gene Symbol:
          Ncbp1
          Gene Name:
          nuclear cap binding protein subunit 1
          Gene Aliases:
          -
          Chromosome Location:
          Chr.5: 61734118 - 61767098 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01436539_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Ncbp1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001014785.1 NP_001014785.1 22 - 23 2335 65
          XM_006238037.2 XP_006238099.1 20 - 21 2165 65
          GenBank mRNA BC092199.1 - 22 - 23 2335 7314745 65
          FQ220875.1 - 6 - 7 650 65

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0500000584.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Ncbp1

          Panther Classification:

          Molecular Function -

          RNA metabolism protein RNA processing factor RNA splicing factor nucleic acid metabolism protein

          Gene Ontology Categories:

          Function(s) Process(es)

          nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
          7-methylguanosine mRNA capping
          mRNA cleavage
          mRNA export from nucleus
          regulation of translational initiation
          biological_process
          gene silencing by RNA
          positive regulation of mRNA 3'-end processing
          mRNA cis splicing, via spliceosome
          RNA 7-methylguanosine cap binding
          poly(A) RNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P1015220 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 601618 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 37941 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 690914 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 897900 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 471964 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 894889 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 886052 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 369271 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 811183 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 586572 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 805073 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 493697 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 77689 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 720425 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 833098 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 637373 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 661240 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 510674 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 762623 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 785295 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 368951 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 95449 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 232780 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 901434 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 498072 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 469460 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 7951 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 65834 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 71877 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 56089 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1015220 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P1015220 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P1015220 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P1015220 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 3112 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 15112 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 35235 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10868844 - -
          Affymetrix Rat Gene 1.0 ST Array 10868845 - -
          Affymetrix Rat Gene 1.0 ST Array 10868841 - -
          Affymetrix Rat Gene 1.0 ST Array 10868842 - -
          Affymetrix Rat Gene 1.0 ST Array 10868847 - -
          Affymetrix Rat Gene 1.0 ST Array 10868830 - -
          Affymetrix Rat Gene 1.0 ST Array 10868831 - -
          Affymetrix Rat Gene 1.0 ST Array 10868843 - -
          Affymetrix Rat Gene 1.0 ST Array 10868838 - -
          Affymetrix Rat Gene 1.0 ST Array 10868839 - -
          Affymetrix Rat Gene 1.0 ST Array 10868835 - -
          Affymetrix Rat Gene 1.0 ST Array 10868846 - -
          Affymetrix Rat Gene 1.0 ST Array 10868852 - -
          Affymetrix Rat Gene 1.0 ST Array 10868848 - -
          Affymetrix Rat Gene 1.0 ST Array 10868834 - -
          Affymetrix Rat Gene 1.0 ST Array 10868832 - -
          Affymetrix Rat Gene 1.0 ST Array 10868836 - -
          Affymetrix Rat Gene 1.0 ST Array 10868849 - -
          Affymetrix Rat Gene 1.0 ST Array 10868850 - -
          Affymetrix Rat Gene 1.0 ST Array 10868840 - -
          Affymetrix Rat Gene 1.0 ST Array 10868851 - -
          Affymetrix Rat Gene 1.0 ST Array 10868837 - -
          Affymetrix Rat Gene 1.0 ST Array 10868833 - -
          Affymetrix Rat Gene 1.1 ST Array 10876567 - -
          Affymetrix Rat Gene 1.1 ST Array 10868829 - -
          Rat Genome 230 2.0 Array 1373978_PM_at - -
          Rat Genome 230 2.0 Array 1378191_at - -
          Rat Genome 230 2.0 Array 1373978_at - -
          Rat Genome 230 2.0 Array 1378191_PM_at - -
          Affymetrix HT Rat Focus Array 1378191_PM_at - -
          Affymetrix HT Rat Focus Array 1373978_PM_at - -
          Affymetrix HT Rat Focus Array 1378191_at - -
          Affymetrix HT Rat Focus Array 1373978_at - -
          Affymetrix Rat Clariom S Assay PSR0500003929.rn.1 TC0500000584.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0500003930.rn.1 TC0500000584.rn.1 RTA TC
          Rat Expression Set 230 1373978_PM_at - -
          Rat Expression Set 230 1373978_at - -
          Rat Expression Set 230 1378191_at - -
          Rat Expression Set 230 1378191_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10868829 - -
          Rat Genome U34 Set rc_AI029428_s_at - -
          Rat Genome U34 Set rc_AI235047_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21963156 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1357484 - -

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          git-commit: 747bde55a712f6f97bf7760408d445eefba4e16f
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