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          • Home
          • › Search Tool
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          • › Rn01462825_m1
          See other NANOG GE Assays ›
          Gene Symbol:
          Nanog
          Gene Name:
          Nanog homeobox
          Gene Aliases:
          -
          Chromosome Location:
          Chr.4: 155531906 - 155539268 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01462825_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Nanog
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001100781.1 NP_001094251.1 2 - 3 623 95
          XM_006237310.2 XP_006237372.1 2 - 3 420 95
          GenBank mRNA AB162852.1 - 1 - 2 227 95
          AB275459.1 - 2 - 3 420 95

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0400001729.rn.1

          Set Membership:

          Amplicon length between 86 and 100 3' Most Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Panther Classification:

          Molecular Function -

          homeodomain transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          mesodermal cell fate commitment
          endodermal cell fate specification
          regulation of transcription, DNA-templated
          cell proliferation
          positive regulation of cell proliferation
          gonad development
          multidimensional cell growth
          embryonic pattern specification
          response to organic substance
          negative regulation of cell fate commitment
          regulation of gene expression
          response to organic cyclic compound
          stem cell division
          stem cell population maintenance
          cell differentiation
          negative regulation of BMP signaling pathway
          response to retinoic acid
          somatic stem cell population maintenance
          cellular response to erythropoietin
          tissue regeneration
          regulation of cell differentiation
          negative regulation of cell differentiation
          positive regulation of transcription, DNA-templated
          positive regulation of mitotic cell cycle
          positive regulation of transcription from RNA polymerase II promoter
          stem cell differentiation
          cellular response to rapamycin
          replicative senescence
          enhancer sequence-specific DNA binding
          molecular_function
          DNA binding
          chromatin binding
          transcription factor activity, sequence-specific DNA binding
          transcription corepressor activity
          sequence-specific DNA binding
          transcription regulatory region DNA binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P015445 - -
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P015451 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 343387 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 86112 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 21579 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 42839 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P015451 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P015445 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P015445 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P015451 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P015451 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P015445 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10858525 - -
          Affymetrix Rat Gene 1.0 ST Array 10858526 - -
          Affymetrix Rat Gene 1.0 ST Array 10858527 - -
          Affymetrix Rat Gene 1.0 ST Array 10858528 - -
          Affymetrix Rat Gene 1.1 ST Array 10858524 - -
          Affymetrix Rat Clariom S Assay PSR0400012550.rn.1 TC0400001729.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400012549.rn.1 TC0400001729.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400012547.rn.1 TC0400001729.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0400012548.rn.1 TC0400001729.rn.1 RTA TC
          Affymetrix Rat Gene 1.0 ST Array 10858524 - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21907287 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1365330 - -

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