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Home
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Search Tool
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Search Results
› Rn01464245_m1
See other HDAC5 GE Assays ›
Gene Symbol:
Hdac5
Gene Name:
histone deacetylase 5
Gene Aliases:
-
Chromosome Location:
Chr.10: 90140183 - 90169853 on Build Rnor_6.0
Species:
Rat
Species Specific ID (Flybase ID):
-
Assay ID
Rn01464245_m1
Best Coverage
Size
FAM-MGB | XS: 75 rxns
FAM-MGB | S: 250 rxns
FAM-MGB | M: 750 rxns
FAM-MGB | L: 2900 rxns
VIC-MGB_PL | S: 360 rxns
VIC-MGB_PL | M: 750 rxns
VIC-MGB_PL | L: 2900 rxns
VIC-MGB | S: 360 rxns
VIC-MGB | M: 750 rxns
VIC-MGB | L: 2900 rxns
Availability
Inventoried
Catalog #
4331182
Price
Your Price
Online offer:
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Genomic Map
Assay Details
More Information
Genomic Map
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Assay Details
Gene Symbol: Hdac5
Interrogated Sequence
Translated Protein
Exon Boundary
Assay Location
IMAGE Clone ID
Amplicon Length
RefSeq
NM_053450.1
NP_445902.1
2905
64
GenBank mRNA
BC086431.1
-
3 - 4
226
64
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More Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1000003859.rn.1
Set Membership:
Amplicon length less than or equal to 70
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
Panther Classification:
Molecular Function -
histone modifying enzyme
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription from RNA polymerase II promoter
osteoblast development
chromatin organization
transcription from RNA polymerase II promoter
protein deacetylation
heart development
regulation of myotube differentiation
negative regulation of myotube differentiation
response to activity
histone deacetylation
neuron differentiation
multicellular organismal response to stress
regulation of gene expression, epigenetic
response to cocaine
response to drug
regulation of protein binding
negative regulation of osteoblast differentiation
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
regulation of skeletal muscle fiber development
positive regulation of sequence-specific DNA binding transcription factor activity
regulation of striated muscle cell differentiation
renal tubule morphogenesis
cellular response to lipopolysaccharide
cellular response to fluid shear stress
negative regulation of cell migration involved in sprouting angiogenesis
positive regulation of neural precursor cell proliferation
regulation of histone H3-K9 acetylation
positive regulation of stem cell proliferation
RNA polymerase III transcription factor binding
core promoter sequence-specific DNA binding
core promoter binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription factor binding
chromatin binding
transcription corepressor activity
histone deacetylase activity
protein kinase C binding
protein binding
transcription factor binding
protein kinase binding
protein deacetylase activity
histone deacetylase binding
transcription regulatory region DNA binding
metal ion binding
repressing transcription factor binding
MicroArray Probes:
Affymetrix
ABI
Array Name
Probe IDs
Targets
Target Type
Affymetrix Rat Clariom S Assay
PSR1000034726.rn.1
TC1000003859.rn.1
RTA TC
Affymetrix Rat Clariom S Assay
PSR1000034727.rn.1
TC1000003859.rn.1
RTA TC
Array Name
Probe IDs
Targets
Target Type
ABI Rat Genome Survey Microarray
21276517
-
-
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