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- Gene Symbol:
-
Rapgef2 - Gene Name:
- Rap guanine nucleotide exchange factor (GEF) 2
- Gene Aliases:
- PDZ-GEF1, RA-GEF-1, nRap GEP
- Chromosome Location:
- Chr.2: 177836191 - 178057397 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Rapgef2 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001107684.1 | NP_001101154.1 | 20 - 21 | 4279 | 79 | |
| XM_006232511.2 | XP_006232573.2 | 25 - 26 | 6191 | 79 | ||
| XM_006232512.2 | XP_006232574.1 | 23 - 24 | 5257 | 79 | ||
| XM_006232513.2 | XP_006232575.1 | 23 - 24 | 5068 | 79 | ||
| XM_008761092.1 | XP_008759314.1 | 29 - 30 | 5561 | 79 | ||
| XM_008761093.1 | XP_008759315.1 | 28 - 29 | 5544 | 79 | ||
| XM_008761094.1 | XP_008759316.1 | 28 - 29 | 5537 | 79 | ||
| XM_008761095.1 | XP_008759317.1 | 29 - 30 | 5235 | 79 | ||
| XM_008761096.1 | XP_008759318.1 | 27 - 28 | 5850 | 79 | ||
| XM_008761097.1 | XP_008759319.1 | 26 - 27 | 5742 | 79 | ||
| XM_008761098.1 | XP_008759320.1 | 26 - 27 | 7034 | 79 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0200003901.rn.1Set Membership: |
Amplicon length between 71 and 85
3' Most
Recommended Assay
Rattus norvegicus
1700
Probe spans exons
|
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
blood vessel development
neuron migration
G-protein coupled receptor signaling pathway
neuropeptide signaling pathway
small GTPase mediated signal transduction
negative regulation of cell proliferation
positive regulation of neuron projection development
cAMP-mediated signaling
ventricular system development
forebrain neuron development
microvillus assembly
neuron projection development
brain-derived neurotrophic factor receptor signaling pathway
positive regulation of protein binding
Rap protein signal transduction
nerve growth factor signaling pathway
positive regulation of GTPase activity
positive regulation of cAMP-mediated signaling
positive regulation of protein kinase activity
negative regulation of melanin biosynthetic process
regulation of synaptic plasticity
negative regulation of dendrite morphogenesis
regulation of small GTPase mediated signal transduction
establishment of endothelial barrier
positive regulation of ERK1 and ERK2 cascade
cellular response to cAMP
cellular response to cGMP
adenylate cyclase-activating adrenergic receptor signaling pathway
protein localization to plasma membrane
establishment of endothelial intestinal barrier
regulation of cell junction assembly
cellular response to nerve growth factor stimulus
positive regulation of cAMP-dependent protein kinase activity
positive regulation of dendritic cell apoptotic process
positive regulation of vasculogenesis
positive regulation of neuron migration
guanyl-nucleotide exchange factor activity
Ras guanyl-nucleotide exchange factor activity
protein binding
Rap guanyl-nucleotide exchange factor activity
protein kinase binding
PDZ domain binding
cAMP binding
cGMP binding
beta-1 adrenergic receptor binding
WW domain binding
phosphatidic acid binding
blood vessel development
neuron migration
G-protein coupled receptor signaling pathway
neuropeptide signaling pathway
small GTPase mediated signal transduction
negative regulation of cell proliferation
positive regulation of neuron projection development
cAMP-mediated signaling
ventricular system development
forebrain neuron development
microvillus assembly
neuron projection development
brain-derived neurotrophic factor receptor signaling pathway
positive regulation of protein binding
Rap protein signal transduction
nerve growth factor signaling pathway
positive regulation of GTPase activity
positive regulation of cAMP-mediated signaling
positive regulation of protein kinase activity
negative regulation of melanin biosynthetic process
regulation of synaptic plasticity
negative regulation of dendrite morphogenesis
regulation of small GTPase mediated signal transduction
establishment of endothelial barrier
positive regulation of ERK1 and ERK2 cascade
cellular response to cAMP
cellular response to cGMP
adenylate cyclase-activating adrenergic receptor signaling pathway
protein localization to plasma membrane
establishment of endothelial intestinal barrier
regulation of cell junction assembly
cellular response to nerve growth factor stimulus
positive regulation of cAMP-dependent protein kinase activity
positive regulation of dendritic cell apoptotic process
positive regulation of vasculogenesis
positive regulation of neuron migration
guanyl-nucleotide exchange factor activity
Ras guanyl-nucleotide exchange factor activity
protein binding
Rap guanyl-nucleotide exchange factor activity
protein kinase binding
PDZ domain binding
cAMP binding
cGMP binding
beta-1 adrenergic receptor binding
WW domain binding
phosphatidic acid binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_42_P800859 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 70194 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 636261 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 857037 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 839887 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 856948 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 480496 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 434896 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 361187 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 127407 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 706730 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 698090 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 358208 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 324937 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 298583 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 764597 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 609659 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 106558 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 934018 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 37652 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 888467 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 205594 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 670091 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 109819 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 825614 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 366796 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 529282 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 433459 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 326095 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 966093 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 958401 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 92878 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 872962 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 172710 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 556333 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 77775 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 150519 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 696350 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 450218 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 758361 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 950204 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 685120 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 474232 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 582087 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 525751 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 333899 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 368274 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 796675 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 37734 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 86003 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 283439 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 529325 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 830802 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 381598 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 822960 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 597332 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 387489 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 923731 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 620363 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 337819 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 128075 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 69915 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 944843 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 386096 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 377811 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 644066 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 55366 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 363128 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 709004 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 301424 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 232876 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 613504 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 117430 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 572820 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 807271 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 939179 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 315069 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 362833 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 694273 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583633 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 40735 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 72140 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 113809 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 41202 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 71637 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 14617 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 8855 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 148333 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 74944 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 43936 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 144096 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 179210 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 7393 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 24287 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_42_P800859 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_42_P800859 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_42_P800859 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P173218 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P441596 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 44927 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 58064 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 14092 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10823776 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823761 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823765 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823771 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823773 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823778 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823781 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823772 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823779 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823775 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823774 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823763 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823769 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823766 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823764 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823777 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823768 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823762 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823767 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823770 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10823760 | - | - |
| Rat Genome 230 2.0 Array | 1373933_at | - | - |
| Rat Genome 230 2.0 Array | 1373933_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1373933_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1373933_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0200026152.rn.1 | TC0200003901.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0200026153.rn.1 | TC0200003901.rn.1 | RTA TC |
| Rat Expression Set 230 | 1373933_PM_at | - | - |
| Rat Expression Set 230 | 1373933_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10823760 | - | - |
| Rat Genome U34 Set | rc_AI231810_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 20812149 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1361539 | - | - |
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