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          • Home
          • › Search Tool
          • › Search Results
          • › Rn01529606_g1
          See other MECP2 GE Assays ›
          Gene Symbol:
          Mecp2
          Gene Name:
          methyl CpG binding protein 2
          Gene Aliases:
          -
          Chromosome Location:
          Chr.X: 156650389 - 156713813 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01529606_g1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 2,694.00
          Your Price
          Online offer:
          2694.0
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Mecp2
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_022673.2 NP_073164.2 3 - 4 582 148
          XM_006229566.2 XP_006229628.1 3 - 4 756 148
          XM_006229567.2 XP_006229629.1 2 - 3 866 148
          GenBank mRNA DQ897368.1 - 2 - 3 458 148
          DQ897369.1 - 3 - 4 582 148
          M94064.1 - 2 - 3 424 148

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0X00001299.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 3' Most Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Mecp2

          Panther Classification:

          Molecular Function -

          DNA metabolism protein

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          behavioral fear response
          response to hypoxia
          startle response
          neurological system process involved in regulation of systemic arterial blood pressure
          regulation of respiratory gaseous exchange by neurological system process
          inositol metabolic process
          mitochondrial electron transport, ubiquinol to cytochrome c
          chromatin silencing
          regulation of gene expression by genetic imprinting
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          glutamine metabolic process
          cellular biogenic amine metabolic process
          chemical synaptic transmission
          synapse assembly
          brain development
          heart development
          respiratory gaseous exchange
          learning
          memory
          long-term memory
          protein localization
          glucocorticoid metabolic process
          positive regulation of cell proliferation
          adult locomotory behavior
          visual learning
          pathogenesis
          post-embryonic development
          response to ionizing radiation
          response to lead ion
          regulation of gene expression
          response to organic cyclic compound
          dendrite development
          histone methylation
          histone acetylation
          proprioception
          sensory perception of pain
          cerebellum development
          ventricular system development
          neuron differentiation
          negative regulation of histone methylation
          neuron projection development
          cardiolipin metabolic process
          response to estradiol
          multicellular organismal response to stress
          negative regulation of histone acetylation
          social behavior
          regulation of gene expression, epigenetic
          neuron maturation
          negative regulation of neuron apoptotic process
          regulation of DNA methylation
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          phosphatidylcholine metabolic process
          regulation of synaptic plasticity
          negative regulation of astrocyte differentiation
          catecholamine secretion
          neuromuscular process controlling posture
          neuromuscular process
          positive regulation of synapse assembly
          excitatory postsynaptic potential
          long-term synaptic potentiation
          four-way junction DNA binding
          DNA binding
          chromatin binding
          transcription factor activity, sequence-specific DNA binding
          mRNA binding
          transcription factor binding
          methyl-CpG binding
          double-stranded methylated DNA binding
          enzyme binding
          protein domain specific binding
          chromatin DNA binding
          siRNA binding
          histone deacetylase binding
          poly(A) RNA binding
          unmethylated CpG binding
          protein N-terminus binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P090105 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 315857 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 318956 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 859859 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 37482 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 220002 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 477647 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 573642 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 288321 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 832827 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 352788 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 10015 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 656880 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 277348 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 782585 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 453581 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 337963 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 838692 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 150854 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 577912 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 311264 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 759377 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 715566 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 433353 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 191815 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 18138 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 571094 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 612269 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 844546 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 567069 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 584412 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 534271 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 380690 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 608971 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 447592 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 618862 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 400689 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 83134 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 503227 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 780610 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 564341 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 453726 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 125147 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 491008 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 674028 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 118290 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 149429 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 85444 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 13108 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 85721 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P090105 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P090105 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P090105 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_43_P12285 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 51428 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 100233 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 59823 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 74733 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 100938 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10940317 - -
          Affymetrix Rat Gene 1.0 ST Array 10940318 - -
          Affymetrix Rat Gene 1.0 ST Array 10940316 - -
          Affymetrix Rat Gene 1.0 ST Array 10940319 - -
          Affymetrix Rat Gene 1.1 ST Array 10940315 - -
          Rat Genome 230 2.0 Array 1369277_PM_at - -
          Rat Genome 230 2.0 Array 1398174_PM_at - -
          Rat Genome 230 2.0 Array 1369277_at - -
          Rat Genome 230 2.0 Array 1398174_at - -
          Affymetrix HT Rat Focus Array 1398174_PM_at - -
          Affymetrix HT Rat Focus Array 1369277_PM_at - -
          Affymetrix HT Rat Focus Array 1398174_at - -
          Affymetrix HT Rat Focus Array 1369277_at - -
          Affymetrix Rat Clariom S Assay PSR0X00007800.rn.1 TC0X00001299.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0X00007804.rn.1 TC0X00001299.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0X00007801.rn.1 TC0X00001299.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0X00007809.rn.1 TC0X00001299.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0X00007807.rn.1 TC0X00001299.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0X00007806.rn.1 TC0X00001299.rn.1 RTA TC
          Rat Expression Set 230 1369277_at - -
          Rat Expression Set 230 1369277_PM_at - -
          Rat Expression Set 230 1398174_PM_at - -
          Rat Expression Set 230 1398174_at - -
          Affymetrix Rat Gene 1.0 ST Array 10940315 - -
          Rat Genome U34 Set M94064_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20711731 - -
          ABI Rat Genome Survey Microarray 22414513 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1353024 - -
          RatRef-12 Expression BeadChip ILMN_57729 - -

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