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          • Home
          • › Search Tool
          • › Search Results
          • › Rn01537344_m1
          See other TCF21 GE Assays ›
          Gene Symbol:
          Tcf21
          Gene Name:
          transcription factor 21
          Gene Aliases:
          Capsulin, Msf-1, Pod1
          Chromosome Location:
          Chr.1: 23906717 - 23909576 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01537344_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
          Your Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Tcf21
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001032397.1 NP_001027569.1 1 - 2 681 95
          GenBank mRNA BC100106.1 - 1 - 2 681 7379660 95

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100000263.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 3' Most Mammalian Gene Collection Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Tcf21

          Panther Classification:

          Molecular Function -

          basic helix-loop-helix transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          ureteric bud development
          branching involved in ureteric bud morphogenesis
          morphogenesis of a branching structure
          kidney development
          vasculature development
          sex determination
          sex differentiation
          organ morphogenesis
          branchiomeric skeletal muscle development
          epithelial cell differentiation
          glomerulus development
          positive regulation of transcription from RNA polymerase II promoter
          lung alveolus development
          spleen development
          embryonic digestive tract morphogenesis
          reproductive structure development
          gland development
          Sertoli cell differentiation
          palate development
          lung morphogenesis
          lung vasculature development
          bronchiole development
          diaphragm development
          respiratory system development
          negative regulation of androgen receptor signaling pathway
          metanephric mesenchymal cell differentiation
          metanephric glomerular capillary formation
          transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
          transcriptional repressor activity, RNA polymerase II core promoter proximal region sequence-specific binding
          histone deacetylase binding
          bHLH transcription factor binding
          protein dimerization activity
          androgen receptor binding
          E-box binding

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_64_P060662 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 228792 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 74156 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P060662 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_64_P060662 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_64_P060662 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P224614 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 701094614 - -
          Agilent Rat cDNA Microarray (G4105A) 701094614 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10702308 - -
          Affymetrix Rat Gene 1.0 ST Array 10702307 - -
          Affymetrix Rat Gene 1.1 ST Array 10702306 - -
          Rat Genome 230 2.0 Array 1388782_PM_at - -
          Rat Genome 230 2.0 Array 1388782_at - -
          Affymetrix HT Rat Focus Array 1388782_at - -
          Affymetrix HT Rat Focus Array 1388782_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0100001488.rn.1 TC0100000263.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100001489.rn.1 TC0100000263.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0100001490.rn.1 TC0100000263.rn.1 RTA TC
          Rat Expression Set 230 1388782_PM_at - -
          Rat Expression Set 230 1388782_at - -
          Affymetrix Rat Gene 1.0 ST Array 10702306 - -
          Rat Genome U34 Set AF061752_at - -
          Rat Genome U34 Set rc_AA800748_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20902858 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1352700 - -

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          Host server : magellan-search-green-b49b87d85-n9r8p:80/100.66.76.150:80.
          git-commit: 5b8c860b7cdb41e9cfe07630520f6b51e109d38e
          git-url: https://github.com/thermofisher/magellan-search
          git-branch: release/2.47.0-Offline