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          • Home
          • › Search Tool
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          • › Rn01637263_m1
          See other CAPN3 GE Assays ›
          Gene Symbol:
          Capn3
          Gene Name:
          calpain 3
          Gene Aliases:
          Lp82, Lp84, Lp85, p94
          Chromosome Location:
          Chr.3: 112227986 - 112278408 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01637263_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Capn3
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_017117.1 NP_058813.1 2 - 3 680 66
          XM_006234728.2 XP_006234790.1 2 - 3 66
          XM_006234729.2 XP_006234791.1 2 - 3 66
          XM_008762080.1 XP_008760302.1 2 - 3 66
          XM_008762081.1 XP_008760303.1 2 - 3 66
          GenBank mRNA AF052540.1 - 2 - 3 66
          AF061726.2 - 2 - 3 66
          AF173834.1 - 2 - 3 66
          AF184950.1 - 2 - 3 66
          J05121.1 - 2 - 3 680 66
          U96367.1 - 2 - 3 66

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0300001531.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Capn3

          Panther Classification:

          Molecular Function -

          cysteine protease

          Gene Ontology Categories:

          Function(s) Process(es)

          autolysis
          protein complex assembly
          proteolysis
          positive regulation of satellite cell activation involved in skeletal muscle regeneration
          response to muscle activity
          myofibril assembly
          negative regulation of protein sumoylation
          response to drug
          negative regulation of apoptotic process
          regulation of I-kappaB kinase/NF-kappaB signaling
          sarcomere organization
          regulation of myoblast differentiation
          positive regulation of proteolysis
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          regulation of catalytic activity
          positive regulation of NF-kappaB transcription factor activity
          positive regulation of release of sequestered calcium ion into cytosol
          response to calcium ion
          muscle structure development
          G1 to G0 transition involved in cell differentiation
          cellular response to calcium ion
          cellular response to salt stress
          protein localization to membrane
          self proteolysis
          sodium-dependent self proteolysis
          catalytic activity
          calcium-dependent cysteine-type endopeptidase activity
          receptor binding
          calcium ion binding
          protein binding
          peptidase activity
          structural constituent of muscle
          enzyme binding
          sodium ion binding
          titin binding
          protein complex scaffold
          ligase regulator activity

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR0300010543.rn.1 TC0300001531.rn.1 RTA TC

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