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          • Home
          • › Search Tool
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          • › Rn01640372_m1
          See other ESR1 GE Assays ›
          Gene Symbol:
          Esr1
          Gene Name:
          estrogen receptor 1
          Gene Aliases:
          ER-alpha, Esr, RNESTROR
          Chromosome Location:
          Chr.1: 41192150 - 41594799 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01640372_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Esr1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_012689.1 NP_036821.1 6 - 7 1458 67
          XM_006227832.2 XP_006227894.1 6 - 7 2058 67
          XM_008758703.1 XP_008756925.1 7 - 8 2106 67
          XM_008758704.1 XP_008756926.1 6 - 7 2030 67
          GenBank mRNA AB477039.1 - 6 - 7 1464 67
          GU111761.1 - 2 - 3 215 67
          X61098.1 - 5 - 6 1322 67
          Y00102.1 - 6 - 7 1458 67

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC0100000418.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Nuclear Receptor Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Esr1

          Gene Ontology Categories:

          Function(s) Process(es)

          antral ovarian follicle growth
          epithelial cell development
          osteoblast development
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          regulation of transcription from RNA polymerase II promoter
          transcription from RNA polymerase II promoter
          phospholipase C-activating G-protein coupled receptor signaling pathway
          positive regulation of cytosolic calcium ion concentration
          androgen metabolic process
          male gonad development
          negative regulation of gene expression
          positive regulation of phospholipase C activity
          intracellular steroid hormone receptor signaling pathway
          intracellular estrogen receptor signaling pathway
          intracellular receptor signaling pathway
          response to estradiol
          regulation of apoptotic process
          negative regulation of I-kappaB kinase/NF-kappaB signaling
          steroid hormone mediated signaling pathway
          negative regulation of sequence-specific DNA binding transcription factor activity
          regulation of neuron apoptotic process
          response to estrogen
          positive regulation of nitric oxide biosynthetic process
          positive regulation of epidermal growth factor receptor signaling pathway
          positive regulation of transcription from RNA polymerase II promoter
          negative regulation of glucose import
          decidualization
          positive regulation of fibroblast proliferation
          positive regulation of retinoic acid receptor signaling pathway
          negative regulation of smooth muscle cell proliferation
          positive regulation of nitric-oxide synthase activity
          positive regulation of sequence-specific DNA binding transcription factor activity
          Sertoli cell development
          Sertoli cell proliferation
          uterus development
          vagina development
          prostate epithelial cord elongation
          prostate epithelial cord arborization involved in prostate glandular acinus morphogenesis
          regulation of branching involved in prostate gland morphogenesis
          mammary gland branching involved in pregnancy
          mammary gland alveolus development
          epithelial cell proliferation involved in mammary gland duct elongation
          positive regulation of ERK1 and ERK2 cascade
          cellular response to estrogen stimulus
          cellular response to estradiol stimulus
          negative regulation of triglyceride metabolic process
          negative regulation of neuron death
          baculum development
          RNA polymerase II core promoter proximal region sequence-specific DNA binding
          core promoter sequence-specific DNA binding
          transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
          DNA binding
          chromatin binding
          transcription factor activity, sequence-specific DNA binding
          steroid hormone receptor activity
          RNA polymerase II transcription factor activity, ligand-activated sequence-specific DNA binding
          steroid binding
          protein binding
          beta-catenin binding
          transcription factor binding
          zinc ion binding
          enzyme binding
          estrogen receptor activity
          type 1 metabotropic glutamate receptor binding
          protein complex binding
          estrogen response element binding
          RNA polymerase II transcription factor activity, estrogen-activated sequence-specific DNA binding
          hormone binding
          identical protein binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR0100002568.rn.1 TC0100000418.rn.1 RTA TC

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