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          • Home
          • › Search Tool
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          • › Rn02531967_s1
          See other BDNF GE Assays ›
          Gene Symbol:
          Bdnf
          Gene Name:
          brain-derived neurotrophic factor
          Gene Aliases:
          -
          Chromosome Location:
          Chr.3: 100768637 - 100819216 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn02531967_s1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price 284.00
          Your Price
          Online offer: 266.65
          266.65
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Bdnf
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001270630.1 NP_001257559.1 2 3678 142
          NM_001270631.1 NP_001257560.1 2 3829 142
          NM_001270632.1 NP_001257561.1 2 3746 142
          NM_001270633.1 NP_001257562.1 2 3670 142
          NM_001270634.1 NP_001257563.1 3 3557 142
          NM_001270635.1 NP_001257564.1 2 3556 142
          NM_001270636.1 NP_001257565.1 2 3542 142
          NM_001270637.1 NP_001257566.1 2 3534 142
          NM_001270638.1 NP_001257567.1 2 3411 142
          NM_012513.4 NP_036645.2 2 3969 142
          XM_006234684.2 XP_006234746.1 2 3677 142
          XM_008762078.1 XP_008760300.1 2 5603 142
          GenBank mRNA AY559248.1 - 2 142
          AY559249.1 - 2 142
          AY559250.1 - 3 142
          CN544668.1 - 1 142
          EF125675.1 - 2 3969 142
          EF125676.1 - 2 3535 142
          EF125677.1 - 2 3747 142
          EF125678.1 - 2 3830 142
          EF125679.1 - 2 3670 142
          EF125680.1 - 2 3678 142
          EF125686.1 - 2 3556 142
          EF125687.1 - 2 3411 142
          EF125688.1 - 2 3543 142
          EF125689.1 - 2 3607 142
          EF125690.1 - 1 3801 142

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          More Information


          Additional Information:

          Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Apoptosis 3' Most Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Both primers and probe map within a single exon

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Bdnf

          Panther Classification:

          Molecular Function -

          neurotrophic factor

          Gene Ontology Categories:

          Function(s) Process(es)

          ureteric bud development
          behavioral fear response
          response to hypoxia
          chronic inflammatory response
          mitochondrial electron transport, NADH to ubiquinone
          transmembrane receptor protein tyrosine kinase signaling pathway
          gamma-aminobutyric acid signaling pathway
          nervous system development
          negative regulation of neuroblast proliferation
          axon guidance
          axon target recognition
          learning or memory
          learning
          circadian rhythm
          feeding behavior
          neuron recognition
          response to light stimulus
          response to light intensity
          response to hormone
          response to auditory stimulus
          glutamate secretion
          response to fluoxetine
          response to activity
          dendrite development
          regulation of metabolic process
          nerve development
          neuron differentiation
          regulation of axon extension
          response to nutrient levels
          response to food
          negative regulation of synaptic transmission, GABAergic
          positive regulation of peptidyl-serine phosphorylation
          response to vitamin A
          response to tumor necrosis factor
          response to potassium ion
          mechanoreceptor differentiation
          response to drug
          fear response
          negative regulation of apoptotic process
          regulation of neuron apoptotic process
          negative regulation of neuron apoptotic process
          positive regulation of neuron differentiation
          negative regulation of striated muscle tissue development
          regulation of retinal cell programmed cell death
          regulation of synaptic plasticity
          regulation of long-term neuronal synaptic plasticity
          positive regulation of long-term neuronal synaptic plasticity
          regulation of short-term neuronal synaptic plasticity
          axon extension
          inner ear development
          cognition
          positive regulation of sequence-specific DNA binding transcription factor activity
          response to electrical stimulus
          positive regulation of synapse assembly
          response to hyperoxia
          excitatory postsynaptic potential
          inhibitory postsynaptic potential
          negative regulation of cell death
          taste bud development
          cellular response to tumor necrosis factor
          cellular response to norepinephrine stimulus
          response to anesthetic
          dendrite extension
          negative regulation of neuron death
          response to L-glutamate
          response to nerve growth factor
          cellular response to nerve growth factor stimulus
          neuron projection extension
          positive regulation of glucocorticoid receptor signaling pathway
          neurotrophin TRKB receptor binding
          growth factor activity

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P437896 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P437896 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P437896 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P437896 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P219026 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P437896 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 100466 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 83885 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 52894 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 103869 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10852628 - -
          Affymetrix Rat Gene 1.0 ST Array 10852626 - -
          Affymetrix Rat Gene 1.0 ST Array 10852629 - -
          Affymetrix Rat Gene 1.0 ST Array 10852634 - -
          Affymetrix Rat Gene 1.0 ST Array 10852621 - -
          Affymetrix Rat Gene 1.0 ST Array 10852633 - -
          Affymetrix Rat Gene 1.0 ST Array 10852635 - -
          Affymetrix Rat Gene 1.0 ST Array 10852631 - -
          Affymetrix Rat Gene 1.0 ST Array 10852622 - -
          Affymetrix Rat Gene 1.0 ST Array 10852623 - -
          Affymetrix Rat Gene 1.0 ST Array 10852630 - -
          Affymetrix Rat Gene 1.0 ST Array 10852627 - -
          Affymetrix Rat Gene 1.0 ST Array 10852632 - -
          Affymetrix Rat Gene 1.0 ST Array 10852625 - -
          Affymetrix Rat Gene 1.0 ST Array 10852624 - -
          Affymetrix Rat Gene 1.1 ST Array 10852620 - -
          Rat Genome 230 2.0 Array 1368678_PM_at - -
          Rat Genome 230 2.0 Array 1368677_at - -
          Rat Genome 230 2.0 Array 1368678_at - -
          Rat Genome 230 2.0 Array 1368677_PM_at - -
          Affymetrix HT Rat Focus Array 1368677_PM_at - -
          Affymetrix HT Rat Focus Array 1368677_at - -
          Affymetrix HT Rat Focus Array 1368678_at - -
          Affymetrix HT Rat Focus Array 1368678_PM_at - -
          Affymetrix Rat Clariom S Assay PSR0300009233.rn.1 TC0300001371.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR0300009228.rn.1 TC0300001371.rn.1 RTA TC
          Rat Expression Set 230 1368678_at - -
          Rat Expression Set 230 1368677_at - -
          Rat Expression Set 230 1368677_PM_at - -
          Rat Expression Set 230 1368678_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10852620 - -
          Rat Genome U34 Set S71201mRNA_at - -
          Rat Genome U34 Set S71196mRNA_s_at - -
          Rat Genome U34 Set X67108_at - -
          Rat Genome U34 Set S76799_at - -
          Rat Genome U34 Set S76758_i_at - -
          Rat Genome U34 Set rc_AI030286_s_at - -
          Rat Genome U34 Set D10938exon_s_at - -
          Rat Genome U34 Set rc_AI030286_s_at - -
          Rat Genome U34 Set S76799_at - -
          Rat Genome U34 Set S71196mRNA_s_at - -
          Rat Genome U34 Set X67108_at - -
          Rat Genome U34 Set D10938exon_s_at - -
          Rat Genome U34 Set S71201mRNA_at - -
          Rat Genome U34 Set S76758_i_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 21565880 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1360447 - -
          RatRef-12 Expression BeadChip ILMN_56546 - -

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