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          • Home
          • › Search Tool
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          • › Rn02607254_g1
          See other DEFA5 GE Assays ›
          Gene Symbol:
          Defa5
          Gene Name:
          defensin, alpha 5, Paneth cell-specific
          Gene Aliases:
          Defa
          Chromosome Location:
          Chr.16: 75338050 - 75340401 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn02607254_g1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Defa5
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_173329.2 NP_775451.2 2 - 3 250 82
          XM_006253367.1 XP_006253429.1 2 - 3 294 82
          GenBank mRNA U16685.1 - 2 - 3 229 82
          U16686.1 - 2 - 3 250 82

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1600001941.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 71 and 85 3' Most Detect Genomic DNA Recommended Assay Rattus norvegicus 1700 Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Defa5

          Panther Classification:

          Molecular Function -

          antimicrobial response protein

          Gene Ontology Categories:

          Function(s)

          antibacterial humoral response
          killing of cells of other organism
          defense response to bacterium
          innate immune response
          defense response to fungus

          MicroArray Probes:

          Agilent Affymetrix ABI Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P230370 - -
          Agilent SurePrint G3 Rat CGH Microarray 1x1M 206743 - -
          Agilent SurePrint G3 Rat CGH Microarray 4x180K 37115 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P230370 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P230370 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P230370 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P230370 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 80047 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10792536 - -
          Affymetrix Rat Gene 1.0 ST Array 10792535 - -
          Affymetrix Rat Gene 1.1 ST Array 10792534 - -
          Rat Genome 230 2.0 Array 1387943_PM_at - -
          Rat Genome 230 2.0 Array 1387943_at - -
          Affymetrix HT Rat Focus Array 1387943_PM_at - -
          Affymetrix HT Rat Focus Array 1387943_at - -
          Affymetrix Rat Clariom S Assay PSR1600014359.rn.1 TC1600001941.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600014356.rn.1 TC1600001941.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1600014357.rn.1 TC1600001941.rn.1 RTA TC
          Rat Expression Set 230 1387943_PM_at - -
          Rat Expression Set 230 1387943_at - -
          Affymetrix Rat Gene 1.0 ST Array 10792534 - -
          Rat Genome U34 Set U16686_at - -
          Array Name Probe IDs Targets Target Type
          ABI Rat Genome Survey Microarray 20847327 - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1375228 - -
          RatRef-12 Expression BeadChip ILMN_60948 - -

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          Host server : magellan-search-blue-64dd947b88-fbg7s:80/100.66.79.246:80.
          git-commit: 0f46c0ba67a87c24f5ac662a3edafcaba07cd08c
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