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- Gene Symbol:
-
RT1-EC2 - Gene Name:
- RT1 class Ib, locus EC2
- Gene Aliases:
- MHCRTA, RATMHCRTA, RT1-A, RT1-Aw2, RT1.Al, RT1.EC2, RT1Aw2, RTS
- Chromosome Location:
- -
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: RT1-EC2 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_012645.1 | NP_036777.1 | 3 | 481 | 98 | |
| GenBank mRNA | AJ004887.1 | - | 2 | 400 | 98 | |
| AJ004888.1 | - | 2 | 400 | 98 | ||
| AJ005024.1 | - | 2 | 400 | 98 | ||
| AJ005025.1 | - | 2 | 400 | 98 | ||
| BC061817.1 | - | 4 | 482 | 5598840 | 98 | |
| M31038.1 | - | 3 | 481 | 98 | ||
Back To TopMore Information
Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
Mammalian Gene Collection
Detect Genomic DNA
Recommended Assay
Rattus norvegicus
1700
Inventoried
Both primers and probe map within a single exon
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
MicroArray Probes:
Agilent
Affymetrix
ABI
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P149196 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_44_P324707 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 103754 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 251150 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 112584 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 690544 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 188553 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 957680 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 788934 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 934989 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 872449 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 484684 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 450157 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 884827 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 685771 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 304858 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 627645 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 707608 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 241176 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 628711 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 615363 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 414525 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 661357 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 668614 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 682973 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 501708 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 32967 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 562281 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 231827 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 78893 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 693384 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 363451 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 836114 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 243993 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 790586 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 586665 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 312821 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 454046 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 402203 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 136707 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 769523 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 842348 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 484179 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 938847 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 473691 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 424571 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 596519 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 403496 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 867178 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 569229 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 659753 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 392956 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 121429 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 421354 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 675176 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 558138 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 346167 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 768699 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 527691 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 481886 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 604530 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 751253 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 815470 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 417053 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 62601 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 20452 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 58303 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 50746 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 162205 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 106527 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 13933 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 56143 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 38814 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 154704 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 160575 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 77013 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 27137 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 147566 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 168508 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 22583 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P324707 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_44_P324707 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_44_P324707 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P196401 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P313652 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P390172 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P324707 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700505726 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 701190523 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 701579084 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 700946767 | - | - |
| Matsumoto (Agilent Rat cDNA Microarray G4105A) | 701466574 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 46955 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 78259 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 1801 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 71878 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 52189 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 16125 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 86065 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 35675 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 63242 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 50687 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 73423 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 91753 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 71387 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 15778 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 21128 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 36482 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 632 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 75041 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 13281 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 102188 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 92552 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 75038 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 15211 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 74059 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 84907 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 701244414 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 701190523 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 701579084 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700946767 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 700505726 | - | - |
| Agilent Rat cDNA Microarray (G4105A) | 701466574 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10831101 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10833946 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10833950 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10831104 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10833948 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10828431 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10833974 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10831103 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10831111 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10831102 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10831107 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10828432 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10828417 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10831105 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10833944 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10831099 | - | - |
| Rat Genome 230 2.0 Array | 1371267_at | - | - |
| Rat Genome 230 2.0 Array | 1369110_x_at | - | - |
| Rat Genome 230 2.0 Array | 1388283_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1370972_x_at | - | - |
| Rat Genome 230 2.0 Array | 1370972_PM_x_at | - | - |
| Rat Genome 230 2.0 Array | 1370428_x_at | - | - |
| Rat Genome 230 2.0 Array | 1370429_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1370428_PM_x_at | - | - |
| Rat Genome 230 2.0 Array | 1371210_PM_s_at | - | - |
| Rat Genome 230 2.0 Array | 1380436_at | - | - |
| Rat Genome 230 2.0 Array | 1388694_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1388202_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1371078_at | - | - |
| Rat Genome 230 2.0 Array | 1388694_at | - | - |
| Rat Genome 230 2.0 Array | 1380436_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1388203_PM_x_at | - | - |
| Rat Genome 230 2.0 Array | 1388283_at | - | - |
| Rat Genome 230 2.0 Array | 1371210_s_at | - | - |
| Rat Genome 230 2.0 Array | 1371111_at | - | - |
| Rat Genome 230 2.0 Array | 1371078_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1371111_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1371267_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1369110_PM_x_at | - | - |
| Rat Genome 230 2.0 Array | 1388071_x_at | - | - |
| Rat Genome 230 2.0 Array | 1371171_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1388202_at | - | - |
| Rat Genome 230 2.0 Array | 1389734_PM_x_at | - | - |
| Rat Genome 230 2.0 Array | 1370429_at | - | - |
| Rat Genome 230 2.0 Array | 1389734_x_at | - | - |
| Rat Genome 230 2.0 Array | 1371171_at | - | - |
| Rat Genome 230 2.0 Array | 1388203_x_at | - | - |
| Rat Genome 230 2.0 Array | 1388071_PM_x_at | - | - |
| Affymetrix HT Rat Focus Array | 1371111_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1388202_at | - | - |
| Affymetrix HT Rat Focus Array | 1388202_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1371171_at | - | - |
| Affymetrix HT Rat Focus Array | 1371210_PM_s_at | - | - |
| Affymetrix HT Rat Focus Array | 1388071_x_at | - | - |
| Affymetrix HT Rat Focus Array | 1371210_s_at | - | - |
| Affymetrix HT Rat Focus Array | 1369110_PM_x_at | - | - |
| Affymetrix HT Rat Focus Array | 1370429_at | - | - |
| Affymetrix HT Rat Focus Array | 1371078_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1371111_at | - | - |
| Affymetrix HT Rat Focus Array | 1371078_at | - | - |
| Affymetrix HT Rat Focus Array | 1369110_x_at | - | - |
| Affymetrix HT Rat Focus Array | 1388071_PM_x_at | - | - |
| Affymetrix HT Rat Focus Array | 1371171_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1370428_x_at | - | - |
| Affymetrix HT Rat Focus Array | 1370429_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1370428_PM_x_at | - | - |
| Rat Expression Set 230 | 1371267_PM_at | - | - |
| Rat Expression Set 230 | 1370429_at | - | - |
| Rat Expression Set 230 | 1388202_at | - | - |
| Rat Expression Set 230 | 1371078_at | - | - |
| Rat Expression Set 230 | 1370428_PM_x_at | - | - |
| Rat Expression Set 230 | 1371171_at | - | - |
| Rat Expression Set 230 | 1371078_PM_at | - | - |
| Rat Expression Set 230 | 1388203_PM_x_at | - | - |
| Rat Expression Set 230 | 1370429_PM_at | - | - |
| Rat Expression Set 230 | 1388203_x_at | - | - |
| Rat Expression Set 230 | 1388071_x_at | - | - |
| Rat Expression Set 230 | 1388071_PM_x_at | - | - |
| Rat Expression Set 230 | 1369110_x_at | - | - |
| Rat Expression Set 230 | 1371267_at | - | - |
| Rat Expression Set 230 | 1371111_PM_at | - | - |
| Rat Expression Set 230 | 1371210_s_at | - | - |
| Rat Expression Set 230 | 1371210_PM_s_at | - | - |
| Rat Expression Set 230 | 1369110_PM_x_at | - | - |
| Rat Expression Set 230 | 1371171_PM_at | - | - |
| Rat Expression Set 230 | 1371111_at | - | - |
| Rat Expression Set 230 | 1370428_x_at | - | - |
| Rat Expression Set 230 | 1388202_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10833944 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10828417 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10831105 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10833969 | - | - |
| Rat Genome U34 Set | AF074608mRNA_f_at | - | - |
| Rat Genome U34 Set | AF074609mRNA_f_at | - | - |
| Rat Genome U34 Set | M10094_g_at | - | - |
| Rat Genome U34 Set | M11071_f_at | - | - |
| Rat Genome U34 Set | M64795_f_at | - | - |
| Rat Genome U34 Set | rc_AI231375_at | - | - |
| Rat Genome U34 Set | rc_AI232284_i_at | - | - |
| Rat Genome U34 Set | rc_AI232284_f_at | - | - |
| Rat Genome U34 Set | M10094_at | - | - |
| Rat Genome U34 Set | M64795_i_at | - | - |
| Rat Genome U34 Set | L40362_f_at | - | - |
| Rat Genome U34 Set | X67504_at | - | - |
| Rat Genome U34 Set | M31018_f_at | - | - |
| Rat Genome U34 Set | M31038_at | - | - |
| Rat Genome U34 Set | rc_AA945159_s_at | - | - |
| Rat Genome U34 Set | rc_AI233121_at | - | - |
| Rat Genome U34 Set | rc_AI103500_f_at | - | - |
| Rat Genome U34 Set | rc_AI103500_i_at | - | - |
| Rat Genome U34 Set | H33922_f_at | - | - |
| Rat Genome U34 Set | rc_AI071237_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21190451 | - | - |
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