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- SNP ID:
- rs79277945
- Gene
-
C17orf50GAS2L2MMP28 - Gene Name
- Set Membership:
- -
- Chromosome Location:
- Chr.17: 35762483 - 35762483 on Build GRCh38
- Polymorphism:
- A/T, Transversion substitution
- Context Sequence [VIC/FAM]:
AGCTTAGTTTCCATGTCAGCCCAGG[A/T]ACTTTCTGCTGGGGCTACTGCTTGT
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||||||||||||||||||||
dbSNP Submissions: |
NA
|
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Phenotype: |
MIM: 611398
MIM: 608417
|
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Literature Links: |
C17orf50 PubMed Links | ||||||||||||||||||||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap | |||
|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | |||
EAS
|
African American - Not Available | YRI (Yoruba) - Not Available | |||
SAS
|
Chinese - Not Available | CHB (Han Chinese) - Not Available | |||
AFR
|
Japanese - Not Available | JPT (Japanese) - Not Available | |||
EUR
|
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AMR
|
| C17orf50 - chromosome 17 open reading frame 50 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_145272.3 | Intron | NP_660315.2 | ||||
| GAS2L2 - growth arrest specific 2 like 2 | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
| MMP28 - matrix metallopeptidase 28 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_001032278.2 | Intron | NP_001027449.1 | ||||
| NM_024302.4 | Intron | NP_077278.1 | ||||
| NM_032950.3 | Intron | NP_116568.1 | ||||
| XM_011525225.1 | Intron | XP_011523527.1 | ||||
| XM_011525226.2 | Intron | XP_011523528.1 | ||||
| XM_011525227.1 | Intron | XP_011523529.1 | ||||
| XM_011525228.1 | Intron | XP_011523530.1 | ||||
| XM_011525229.2 | Intron | XP_011523531.1 | ||||
| XM_011525230.1 | Intron | XP_011523532.1 | ||||
| XM_011525231.1 | Intron | XP_011523533.1 | ||||
| XM_011525232.2 | Intron | XP_011523534.2 | ||||
| XM_017025061.1 | Intron | XP_016880550.1 | ||||
| XM_017025062.1 | Intron | XP_016880551.1 | ||||
| XM_017025063.1 | Intron | XP_016880552.1 | ||||
| XM_017025064.1 | Intron | XP_016880553.1 | ||||
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