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ABCB1
Genomic Map
Back To TopAssay Details
Species: |
Human | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
dbSNP Submissions: |
NA
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Phenotype: |
MIM: 171050
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Literature Links: |
ABCB1 PubMed Links | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap | ||||||
|---|---|---|---|---|---|---|---|---|
| Global - Not Available | Caucasian
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CEPH (CEU)
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| EAS - Not Available | Caucasian
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YRI (Yoruba) - Not Available | ||||||
| SAS - Not Available | African American
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JPT (Japanese)
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| AFR - Not Available | African American
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CHB (Han Chinese)
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| EUR - Not Available | Japanese
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| AMR - Not Available | Japanese
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Chinese
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Chinese
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| ABCB1 - ATP binding cassette subfamily B member 1 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_000927.4 | 3170 | Missense Mutation | NP_000918.2 | |||
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Important Information
Assay C_11711720C_30 reports the major (C) and one minor (A) allele of a triallelic SNP. Assay C_11711720D_40 reports the major (C) and other minor (T) allele. Each allele of rs2032582 is found with relatively high frequency in different populations, thus both assays are required to accurately determine sample genotypes. Use of just one assay will lead to incorrect genotype calls. Run both assays separately on the same samples and analyze data as described in the PGx Experiments User Guide (Pub. # MAN0009612) Chapter 5 section 'TaqMan DME genotyping assays to triallelic SNPs and adjacent SNP targets'.
Assay C_11711720D_40 reports the major (C) and other minor (T) allele.Set Membership: |
HapMap
DME
Validated
Inventoried
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Panther Classification:
Gene Ontology Categories:
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