Search
LOADING 
- SNP ID:
- rs137859165
- Gene
-
CD44 - Gene Name
- Set Membership:
- -
- Chromosome Location:
- Chr.11: 35229219 - 35229219 on Build GRCh38
- Polymorphism:
- A/G, Transition Substitution
- Context Sequence [VIC/FAM]:
GTGGACTCAACGGAGAGGCCAGCAA[A/G]TCTCAGGAAATGGTGCATTTGGTGA
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||
dbSNP Submissions: |
NA
|
||||||||||||||||||||
Phenotype: |
MIM: 107269
|
||||||||||||||||||||
Literature Links: |
CD44 PubMed Links | ||||||||||||||||||||
Allele Nomenclature: |
|||||||||||||||||||||
Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
| CD44 - CD44 molecule (Indian blood group) | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_000610.3 | 2018 | Silent Mutation | AAA,AAG | K,K 705 | NP_000601.3 | |
| NM_001001389.1 | 2018 | Silent Mutation | AAA,AAG | K,K 662 | NP_001001389.1 | |
| NM_001001390.1 | 2018 | Silent Mutation | AAA,AAG | K,K 456 | NP_001001390.1 | |
| NM_001001391.1 | 2018 | Silent Mutation | AAA,AAG | K,K 324 | NP_001001391.1 | |
| NM_001001392.1 | 2018 | Missense Mutation | ATC,GTC | I,V 118 | NP_001001392.1 | |
| NM_001202555.1 | 2018 | Silent Mutation | AAA,AAG | K,K 392 | NP_001189484.1 | |
| NM_001202556.1 | 2018 | Silent Mutation | AAA,AAG | K,K 303 | NP_001189485.1 | |
| NM_001202557.1 | 2018 | Intron | NP_001189486.1 | |||
| XM_005253231.2 | 2018 | Silent Mutation | AAA,AAG | K,K 706 | XP_005253288.1 | |
| XM_005253232.2 | 2018 | Silent Mutation | AAA,AAG | K,K 705 | XP_005253289.1 | |
| XM_005253233.2 | 2018 | Silent Mutation | AAA,AAG | K,K 666 | XP_005253290.1 | |
| XM_005253234.2 | 2018 | Silent Mutation | AAA,AAG | K,K 665 | XP_005253291.1 | |
| XM_005253235.2 | 2018 | Silent Mutation | AAA,AAG | K,K 663 | XP_005253292.1 | |
| XM_005253238.2 | 2018 | Silent Mutation | AAA,AAG | K,K 543 | XP_005253295.1 | |
| XM_005253239.2 | 2018 | Silent Mutation | AAA,AAG | K,K 541 | XP_005253296.1 | |
| XM_005253240.2 | 2018 | Silent Mutation | AAA,AAG | K,K 498 | XP_005253297.1 | |
| XM_006718388.1 | 2018 | Silent Mutation | AAA,AAG | K,K 704 | XP_006718451.1 | |
| XM_006718390.3 | 2018 | Intron | XP_006718453.1 | |||
| XM_011520482.1 | 2018 | Silent Mutation | AAA,AAG | K,K 638 | XP_011518784.1 | |
| XM_011520483.1 | 2018 | Silent Mutation | AAA,AAG | K,K 621 | XP_011518785.1 | |
| XM_011520484.1 | 2018 | Silent Mutation | AAA,AAG | K,K 620 | XP_011518786.1 | |
| XM_011520485.1 | 2018 | Silent Mutation | AAA,AAG | K,K 619 | XP_011518787.1 | |
| XM_011520486.1 | 2018 | Silent Mutation | AAA,AAG | K,K 500 | XP_011518788.1 | |
| XM_011520487.2 | 2018 | Intron | XP_011518789.1 | |||
| XM_011520488.1 | 2018 | Silent Mutation | AAA,AAG | K,K 388 | XP_011518790.1 | |
| XM_011520489.2 | 2018 | Intron | XP_011518791.1 | |||
| XM_017018583.1 | 2018 | Silent Mutation | AAA,AAG | K,K 662 | XP_016874072.1 | |
| XM_017018584.1 | 2018 | Silent Mutation | AAA,AAG | K,K 409 | XP_016874073.1 | |
| XM_017018585.1 | 2018 | Silent Mutation | AAA,AAG | K,K 366 | XP_016874074.1 | |
Back To TopMore Information
Additional Information:
For this assay, SNP(s) [rs376706979] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Gene Ontology Categories:
Back To Top