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- SNP ID:
- rs142169267
- Gene
-
C17orf89LOC105371925SLC38A10TEPSIN - Gene Name
- Set Membership:
- -
- Chromosome Location:
- Chr.17: 81239651 - 81239651 on Build GRCh38
- Polymorphism:
- G/A, Transition substitution
- Context Sequence [VIC/FAM]:
AGGACTTCTGCGCGCGGGAGTTCGA[G/A]GCCCTGCGGAGCTGCTTCGCCGCTG
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||||||||||||||||||||
dbSNP Submissions: |
NA
|
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Phenotype: |
MIM: 616525
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Literature Links: |
C17orf89 PubMed Links | ||||||||||||||||||||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap | |||
|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | |||
EAS
|
African American - Not Available | YRI (Yoruba) - Not Available | |||
SAS
|
Chinese - Not Available | CHB (Han Chinese) - Not Available | |||
AFR
|
Japanese - Not Available | JPT (Japanese) - Not Available | |||
EUR
|
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AMR
|
| C17orf89 - chromosome 17 open reading frame 89 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_001086521.1 | 221 | Silent Mutation | GAA,GAG | E,E 56 | NP_001079990.1 | |
| LOC105371925 - uncharacterized LOC105371925 | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
| SLC38A10 - solute carrier family 38 member 10 | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
| TEPSIN - TEPSIN, adaptor related protein complex 4 accessory protein | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_144679.2 | 221 | Intron | NP_653280.1 | |||
| XM_005257066.2 | 221 | Intron | XP_005257123.1 | |||
| XM_005257067.2 | 221 | Intron | XP_005257124.1 | |||
| XM_006721709.3 | 221 | Intron | XP_006721772.1 | |||
| XM_006721712.2 | 221 | Intron | XP_006721775.1 | |||
| XM_011524355.1 | 221 | Intron | XP_011522657.1 | |||
| XM_011524356.1 | 221 | Intron | XP_011522658.1 | |||
| XM_011524357.1 | 221 | Intron | XP_011522659.1 | |||
| XM_011524358.2 | 221 | Intron | XP_011522660.1 | |||
| XM_017024202.1 | 221 | Intron | XP_016879691.1 | |||
| XM_017024203.1 | 221 | Intron | XP_016879692.1 | |||
| XM_017024204.1 | 221 | Intron | XP_016879693.1 | |||
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