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- SNP ID:
- rs142796435
- Gene
-
IFNA6 - Gene Name
- Set Membership:
- -
- Chromosome Location:
- Chr.9: 21350578 - 21350578 on Build GRCh38
- Polymorphism:
- A/G, Transition Substitution
- Context Sequence [VIC/FAM]:
AGTTCAGTATAGAGTTTGTCTAGAA[A/G]CCTCTCATCCCAAGCAACAGATGAG
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||||||||||||||||||||
dbSNP Submissions: |
NA
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Phenotype: |
MIM: 147566
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Literature Links: |
IFNA6 PubMed Links | ||||||||||||||||||||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap | |||
|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | |||
EAS
|
African American - Not Available | YRI (Yoruba) - Not Available | |||
SAS
|
Chinese - Not Available | CHB (Han Chinese) - Not Available | |||
AFR
|
Japanese - Not Available | JPT (Japanese) - Not Available | |||
EUR
|
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AMR
|
| IFNA6 - interferon alpha 6 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_021002.2 | 310 | Missense Mutation | CTT,TTT | L,F 104 | NP_066282.1 | |
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Additional Information:
For this assay, SNP(s) [rs2988573] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Panther Classification:
Gene Ontology Categories:
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