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- SNP ID:
- rs201111117
- Gene
-
PER3VAMP3 - Gene Name
- Set Membership:
- -
- Chromosome Location:
- Chr.1: 7786793 - 7786793 on Build GRCh38
- Polymorphism:
- A/G, Transition substitution
- Context Sequence [VIC/FAM]:
GCAGATGTGAGCATGTACAGTCTTG[A/G]GGAGCTGGCCACTATCGCTTCAGAA
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||
dbSNP Submissions: |
13 submissions
|
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Phenotype: |
MIM: 603427
MIM: 603657
|
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Literature Links: |
PER3 PubMed Links | ||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
| PER3 - period circadian clock 3 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_001289861.1 | 486 | Missense Mutation | GAG,GGG | E,G 116 | NP_001276790.1 | |
| NM_001289862.1 | 486 | Missense Mutation | GAG,GGG | E,G 116 | NP_001276791.1 | |
| NM_001289863.1 | 486 | Missense Mutation | GAG,GGG | E,G 116 | NP_001276792.1 | |
| NM_001289864.1 | 486 | UTR 5 | NP_001276793.1 | |||
| NM_016831.2 | 486 | Missense Mutation | GAG,GGG | E,G 116 | NP_058515.1 | |
| XM_005263524.3 | 486 | Missense Mutation | GAG,GGG | E,G 116 | XP_005263581.1 | |
| XM_011542385.2 | 486 | Missense Mutation | GAG,GGG | E,G 116 | XP_011540687.1 | |
| XM_011542390.2 | 486 | Missense Mutation | GAG,GGG | E,G 116 | XP_011540692.1 | |
| XM_017002723.1 | 486 | Missense Mutation | GAG,GGG | E,G 116 | XP_016858212.1 | |
| XM_017002724.1 | 486 | Missense Mutation | GAG,GGG | E,G 116 | XP_016858213.1 | |
| XM_017002725.1 | 486 | Missense Mutation | GAG,GGG | E,G 116 | XP_016858214.1 | |
| XM_017002726.1 | 486 | Missense Mutation | GAG,GGG | E,G 116 | XP_016858215.1 | |
| XM_017002727.1 | 486 | Missense Mutation | GAG,GGG | E,G 60 | XP_016858216.1 | |
| XM_017002728.1 | 486 | Intron | XP_016858217.1 | |||
| XM_017002729.1 | 486 | Intron | XP_016858218.1 | |||
| XM_017002730.1 | 486 | Intron | XP_016858219.1 | |||
| XM_017002731.1 | 486 | Intron | XP_016858220.1 | |||
| XM_017002732.1 | 486 | Intron | XP_016858221.1 | |||
| XM_017002733.1 | 486 | UTR 5 | XP_016858222.1 | |||
| XM_017002734.1 | 486 | UTR 5 | XP_016858223.1 | |||
| XM_017002735.1 | 486 | UTR 5 | XP_016858224.1 | |||
| XM_017002736.1 | 486 | UTR 5 | XP_016858225.1 | |||
| XM_017002737.1 | 486 | Intron | XP_016858226.1 | |||
| XM_017002738.1 | 486 | Intron | XP_016858227.1 | |||
| VAMP3 - vesicle associated membrane protein 3 | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
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