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- SNP ID:
- rs773172269
- Gene
-
LOC107985544OSBP2 - Gene Name
- Set Membership:
- -
- Chromosome Location:
- Chr.22: 30887447 - 30887447 on Build GRCh38
- Polymorphism:
- C/T, Transition substitution
- Context Sequence [VIC/FAM]:
CCAGGCCTGCAGGGACTTCTTGGAA[C/T]TAGCAGAGATACACAGTCGGAAATG
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||
dbSNP Submissions: |
NA
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Phenotype: |
MIM: 606729
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Literature Links: |
LOC107985544 PubMed Links | ||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
| LOC107985544 - uncharacterized LOC107985544 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| XM_017029172.1 | 1159 | Intron | XP_016884661.1 | |||
| OSBP2 - oxysterol binding protein 2 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_001282738.1 | 1159 | Silent Mutation | CTA,TTA | L,L 212 | NP_001269667.1 | |
| NM_001282739.1 | 1159 | Silent Mutation | CTA,TTA | L,L 377 | NP_001269668.1 | |
| NM_001282740.1 | 1159 | Silent Mutation | CTA,TTA | L,L 11 | NP_001269669.1 | |
| NM_001282741.1 | 1159 | Silent Mutation | CTA,TTA | L,L 119 | NP_001269670.1 | |
| NM_001282742.1 | 1159 | UTR 5 | NP_001269671.1 | |||
| NM_030758.3 | 1159 | Silent Mutation | CTA,TTA | L,L 377 | NP_110385.1 | |
| XM_005261465.4 | 1159 | Silent Mutation | CTA,TTA | L,L 377 | XP_005261522.1 | |
| XM_006724203.2 | 1159 | Silent Mutation | CTA,TTA | L,L 377 | XP_006724266.2 | |
| XM_006724207.2 | 1159 | Silent Mutation | CTA,TTA | L,L 11 | XP_006724270.1 | |
| XM_006724208.3 | 1159 | UTR 5 | XP_006724271.1 | |||
| XM_011530057.1 | 1159 | Silent Mutation | CTA,TTA | L,L 377 | XP_011528359.1 | |
| XM_011530058.1 | 1159 | Silent Mutation | CTA,TTA | L,L 377 | XP_011528360.1 | |
| XM_011530059.2 | 1159 | Silent Mutation | CTA,TTA | L,L 377 | XP_011528361.1 | |
| XM_011530060.1 | 1159 | Silent Mutation | CTA,TTA | L,L 119 | XP_011528362.1 | |
| XM_011530061.1 | 1159 | UTR 5 | XP_011528363.1 | |||
| XM_011530062.1 | 1159 | Silent Mutation | CTA,TTA | L,L 11 | XP_011528364.1 | |
| XM_017028708.1 | 1159 | Silent Mutation | CTA,TTA | L,L 377 | XP_016884197.1 | |
| XM_017028709.1 | 1159 | Silent Mutation | CTA,TTA | L,L 377 | XP_016884198.1 | |
| XM_017028710.1 | 1159 | Silent Mutation | CTA,TTA | L,L 204 | XP_016884199.1 | |
| XM_017028711.1 | 1159 | Silent Mutation | CTA,TTA | L,L 100 | XP_016884200.1 | |
| XM_017028712.1 | 1159 | Silent Mutation | CTA,TTA | L,L 11 | XP_016884201.1 | |
| XM_017028713.1 | 1159 | Silent Mutation | CTA,TTA | L,L 100 | XP_016884202.1 | |
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