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See other TMPRSS2 GT Assays ›
SNP ID:
rs12329760
Gene
TMPRSS2
Gene Name
Set Membership:
> HapMap
Chromosome Location:
Chr.21: 41480570 - 41480570 on Build GRCh38
Polymorphism:
C/T, Transition substitution
Context Sequence [VIC/FAM]:

CAGGACTTCCTCTGAGATGAGTACA[C/T]CTGAAGGATGAAGTTTGGTCCGTAG

Assay ID C__25622353_20
Size
Availability Made To Order
Catalog # 4351379
Price
Your Price
Online offer:
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Assay Details



Species:

 Human

dbSNP Submissions:

 NA

Phenotype:

 MIM: 602060

Literature Links:

 TMPRSS2 PubMed Links

Allele Nomenclature:

Minor Allele Frequency:
1000Genome Applied Biosystems® HapMap
Global
T (0.26)
(0.74)
Caucasian - Not Available CEPH (CEU)
T (0.24)
(0.76)
EAS
T (0.36)
(0.64)
African American - Not Available YRI (Yoruba)
T (0.25)
(0.75)
SAS
T (0.23)
(0.77)
Chinese - Not Available JPT (Japanese)
T (0.40)
(0.60)
AFR
T (0.29)
(0.71)
Japanese - Not Available CHB (Han Chinese)
T (0.41)
(0.59)
EUR
T (0.24)
(0.76)
AMR
T (0.15)
(0.85)
TMPRSS2 - transmembrane protease, serine 2
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_001135099.1 612 Missense Mutation ATG,GTG M,V 197 NP_001128571.1
NM_005656.3 612 Missense Mutation ATG,GTG M,V 160 NP_005647.3
XM_005261043.2 612 Missense Mutation ATG,GTG M,V 120 XP_005261100.1
XM_011529731.2 612 Missense Mutation ATG,GTG M,V 160 XP_011528033.1
XM_011529732.2 612 Missense Mutation ATG,GTG M,V 160 XP_011528034.1
XM_011529733.1 612 Missense Mutation ATG,GTG M,V 52 XP_011528035.1

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