Assay Details

Species:	Human
dbSNP Submissions:	NA
Phenotype:	MIM: 613781 MIM: 601955
Literature Links:	CCDC125 PubMed Links
Allele Nomenclature:
Minor Allele Frequency:

1000Genome

Applied Biosystems^®

HapMap

Global

C (0.37)

(0.63)

Caucasian - Not Available

CEPH (CEU)

C (0.38)

(0.62)

EAS

C (0.50)

(0.50)

African American - Not Available

YRI (Yoruba)

C (0.18)

(0.82)

SAS

C (0.34)

(0.66)

Chinese - Not Available

JPT (Japanese)

C (0.32)

(0.68)

AFR

C (0.23)

(0.77)

Japanese - Not Available

CHB (Han Chinese)

T (0.42)

(0.58)

EUR

C (0.46)

(0.54)

AMR

C (0.36)

(0.64)

CCDC125 - coiled-coil domain containing 125
Transcript Accession	SNP Location	SNP Type	Observed Codons	Observed Amino Acid	Protein ID
NM_001297696.1		Intron			NP_001284625.1
NM_001297697.1		Intron			NP_001284626.1
NM_176816.4		Intron			NP_789786.2
XM_005248458.4		Intron			XP_005248515.1
XM_005248459.4		Intron			XP_005248516.1
XM_005248461.3		Intron			XP_005248518.1
XM_005248463.3		Intron			XP_005248520.1
XM_005248464.3		Intron			XP_005248521.1
XM_006714569.3		Intron			XP_006714632.1
XM_006714570.3		Intron			XP_006714633.1
XM_011543255.2		Intron			XP_011541557.1
XM_011543256.2		Intron			XP_011541558.1
XM_011543257.2		Intron			XP_011541559.1
XM_011543258.2		Intron			XP_011541560.1
XM_011543259.2		Intron			XP_011541561.1
XM_011543260.2		Intron			XP_011541562.1
XM_017009206.1		Intron			XP_016864695.1
XM_017009207.1		Intron			XP_016864696.1
XM_017009208.1		Intron			XP_016864697.1
XM_017009209.1		Intron			XP_016864698.1
XM_017009210.1		Intron			XP_016864699.1
XM_017009211.1		Intron			XP_016864700.1

CDK7 - cyclin dependent kinase 7
Transcript Accession	SNP Location	SNP Type	Observed Codons	Observed Amino Acid	Protein ID
NM_001324069.1		Intron			NP_001310998.1
NM_001324070.1		Intron			NP_001310999.1
NM_001324071.1		Intron			NP_001311000.1
NM_001324072.1		Intron			NP_001311001.1
NM_001324074.1		Intron			NP_001311003.1
NM_001324075.1		Intron			NP_001311004.1
NM_001324077.1		Intron			NP_001311006.1
NM_001324078.1		Intron			NP_001311007.1
NM_001799.3		Intron			NP_001790.1
XM_011543094.2		Intron			XP_011541396.1

More Information

Additional Information:

For this assay, SNP(s) [rs112988930] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.