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- SNP ID:
- rs201404178
- Gene
-
CIDEC - Gene Name
- Set Membership:
- -
- Chromosome Location:
- Chr.3: 9867248 - 9867248 on Build GRCh38
- Polymorphism:
- C/T, Transition Substitution
- Context Sequence [VIC/FAM]:
GCAGGTAACAGGAGGTGCCAAGCAG[C/T]ACGTGGCCTGTGGCCTGCATGCTGA
Genomic Map
Back To TopAssay 상세 정보
Species: |
Human | |||||||||||||||||||||||
dbSNP Submissions: |
NA
|
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Phenotype: |
MIM: 612120
|
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Literature Links: |
CIDEC PubMed Links | |||||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap | |||
|---|---|---|---|---|---|
Global
|
Caucasian - Not Available | CEPH (CEU) - Not Available | |||
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available | |||
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available | |||
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available | |||
| EUR - Not Available | |||||
| AMR - Not Available |
| CIDEC - cell death inducing DFFA like effector c | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_001199551.1 | 689 | Silent Mutation | GTA,GTG | V,V 211 | NP_001186480.1 | |
| NM_001199552.1 | 689 | Silent Mutation | GTA,GTG | V,V 201 | NP_001186481.1 | |
| NM_001199623.1 | 689 | Silent Mutation | GTA,GTG | V,V 214 | NP_001186552.1 | |
| NM_001321142.1 | 689 | Silent Mutation | GTA,GTG | V,V 201 | NP_001308071.1 | |
| NM_001321143.1 | 689 | Silent Mutation | GTA,GTG | V,V 127 | NP_001308072.1 | |
| NM_001321144.1 | 689 | Silent Mutation | GTA,GTG | V,V 127 | NP_001308073.1 | |
| NM_022094.3 | 689 | Silent Mutation | GTA,GTG | V,V 201 | NP_071377.2 | |
Back To Top추가 정보
Additional Information:
For this assay, SNP(s) [rs17222536] are located under a probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Gene Ontology Categories:
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