Genomic Map

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Assay Details

Species:	Human
dbSNP Submissions:	NA
Phenotype:	MIM: 610652
Literature Links:	LINC00473 PubMed Links
Allele Nomenclature:
Minor Allele Frequency:

1000Genome

Applied Biosystems^®

HapMap

Global

T (0.21)

(0.79)

Caucasian - Not Available

CEPH (CEU)

T (0.21)

(0.79)

EAS

T (0.28)

(0.72)

African American - Not Available

YRI (Yoruba)

T (0.22)

(0.78)

SAS

T (0.09)

(0.91)

Chinese - Not Available

JPT (Japanese)

T (0.30)

(0.70)

AFR

T (0.22)

(0.78)

Japanese - Not Available

CHB (Han Chinese)

T (0.26)

(0.74)

EUR

T (0.18)

(0.82)

AMR

T (0.29)

(0.71)

LINC00473 - long intergenic non-protein coding RNA 473
There are no transcripts associated with this gene.

PDE10A - phosphodiesterase 10A
Transcript Accession	SNP Location	SNP Type	Observed Codons	Observed Amino Acid	Protein ID
NM_001130690.2		Intron			NP_001124162.1
NM_006661.3		Intron			NP_006652.1
XM_006715321.3		Intron			XP_006715384.1
XM_011535387.2		Intron			XP_011533689.2
XM_011535388.2		Intron			XP_011533690.1
XM_011535393.2		Intron			XP_011533695.1
XM_017010194.1		Intron			XP_016865683.1
XM_017010195.1		Intron			XP_016865684.1
XM_017010196.1		Intron			XP_016865685.1
XM_017010197.1		Intron			XP_016865686.1

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More Information

Additional Information:

For this assay, SNP(s) [rs77343208] are located under a primer sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.