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- SNP ID:
- rs71541561
- Gene
-
PXNPXN-AS1 - Gene Name
- Set Membership:
- -
- Chromosome Location:
- Chr.12: 120213914 - 120213914 on Build GRCh38
- Polymorphism:
- A/G, Transition substitution
- Context Sequence [VIC/FAM]:
TATAGTTCTCCAGGATGGCCCGGGC[A/G]CAGCCGCCACACTTGGGTGCGAACA
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||
dbSNP Submissions: |
NA
|
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Phenotype: |
MIM: 602505
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Literature Links: |
PXN PubMed Links | ||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
| PXN - paxillin | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_001080855.2 | 2260 | Silent Mutation | TGC,TGT | C,C 479 | NP_001074324.1 | |
| NM_001243756.1 | 2260 | Silent Mutation | TGC,TGT | C,C 493 | NP_001230685.1 | |
| NM_002859.3 | 2260 | Silent Mutation | TGC,TGT | C,C 445 | NP_002850.2 | |
| NM_025157.4 | 2260 | Silent Mutation | TGC,TGT | C,C 312 | NP_079433.3 | |
| XM_005253917.3 | 2260 | Silent Mutation | TGC,TGT | C,C 291 | XP_005253974.1 | |
| XM_006719532.1 | 2260 | Silent Mutation | TGC,TGT | C,C 1017 | XP_006719595.1 | |
| XM_006719534.1 | 2260 | Silent Mutation | TGC,TGT | C,C 884 | XP_006719597.1 | |
| XM_006719535.3 | 2260 | Silent Mutation | TGC,TGT | C,C 884 | XP_006719598.1 | |
| XM_006719536.2 | 2260 | Silent Mutation | TGC,TGT | C,C 884 | XP_006719599.1 | |
| XM_011538622.1 | 2260 | Silent Mutation | TGC,TGT | C,C 884 | XP_011536924.1 | |
| XM_011538623.1 | 2260 | Silent Mutation | TGC,TGT | C,C 884 | XP_011536925.1 | |
| XM_017019726.1 | 2260 | Silent Mutation | TGC,TGT | C,C 1023 | XP_016875215.1 | |
| XM_017019727.1 | 2260 | Silent Mutation | TGC,TGT | C,C 1018 | XP_016875216.1 | |
| XM_017019728.1 | 2260 | Silent Mutation | TGC,TGT | C,C 1015 | XP_016875217.1 | |
| XM_017019729.1 | 2260 | Silent Mutation | TGC,TGT | C,C 975 | XP_016875218.1 | |
| XM_017019730.1 | 2260 | Silent Mutation | TGC,TGT | C,C 1023 | XP_016875219.1 | |
| XM_017019731.1 | 2260 | Silent Mutation | TGC,TGT | C,C 884 | XP_016875220.1 | |
| XM_017019732.1 | 2260 | Intron | XP_016875221.1 | |||
| XM_017019733.1 | 2260 | Silent Mutation | TGC,TGT | C,C 828 | XP_016875222.1 | |
| XM_017019734.1 | 2260 | Silent Mutation | TGC,TGT | C,C 776 | XP_016875223.1 | |
| XM_017019735.1 | 2260 | Silent Mutation | TGC,TGT | C,C 746 | XP_016875224.1 | |
| XM_017019736.1 | 2260 | Silent Mutation | TGC,TGT | C,C 636 | XP_016875225.1 | |
| XM_017019737.1 | 2260 | Silent Mutation | TGC,TGT | C,C 588 | XP_016875226.1 | |
| XM_017019738.1 | 2260 | Silent Mutation | TGC,TGT | C,C 533 | XP_016875227.1 | |
| XM_017019739.1 | 2260 | Silent Mutation | TGC,TGT | C,C 499 | XP_016875228.1 | |
| XM_017019740.1 | 2260 | Silent Mutation | TGC,TGT | C,C 485 | XP_016875229.1 | |
| XM_017019741.1 | 2260 | Silent Mutation | TGC,TGT | C,C 477 | XP_016875230.1 | |
| XM_017019742.1 | 2260 | Silent Mutation | TGC,TGT | C,C 451 | XP_016875231.1 | |
| XM_017019743.1 | 2260 | Silent Mutation | TGC,TGT | C,C 312 | XP_016875232.1 | |
| PXN-AS1 - PXN antisense RNA 1 | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
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