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SNP ID:
rs1281093
Gene
SH3TC1
Gene Name
Set Membership:
> HapMap > Validated
Chromosome Location:
Chr.4: 8233177 - 8233177 on Build GRCh38
Polymorphism:
A/G, Transition substitution
Context Sequence [VIC/FAM]:

CAGTTCCCTCAGAAGGATGTCCTTC[A/G]TCTTTTCCTTGCCGTGTGTGTTCAA

Assay ID C___1900736_1_
Size
Availability Made To Order
Catalog # 4351379
Price
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Assay Details



Species:

 Human

dbSNP Submissions:

 NA

Phenotype:

Literature Links:

 SH3TC1 PubMed Links

Allele Nomenclature:

Minor Allele Frequency:
1000Genome Applied Biosystems® HapMap
Global
C (0.35)
(0.65)
Caucasian
G (0.42)
(0.58)
CEPH (CEU)
C (0.38)
(0.62)
EAS
C (0.30)
(0.70)
African American
G (0.28)
(0.72)
YRI (Yoruba)
C (0.30)
(0.70)
SAS
C (0.35)
(0.65)
Chinese - Not Available JPT (Japanese)
C (0.40)
(0.60)
AFR
C (0.35)
(0.65)
Japanese - Not Available CHB (Han Chinese)
C (0.30)
(0.70)
EUR
C (0.43)
(0.57)
AMR
C (0.34)
(0.66)
SH3TC1 - SH3 domain and tetratricopeptide repeats 1
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_001318480.1 Intron NP_001305409.1
NM_018986.4 Intron NP_061859.3
XM_006713889.2 Intron XP_006713952.1
XM_006713891.3 Intron XP_006713954.1
XM_011513488.1 Intron XP_011511790.1
XM_011513489.2 Intron XP_011511791.1
XM_017008300.1 Intron XP_016863789.1
XM_017008301.1 Intron XP_016863790.1
XM_017008302.1 Intron XP_016863791.1

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More Information


Set Membership:

 HapMap Validated

Gene Ontology Categories:

Function(s)


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