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          • › Search Tool
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          • › C___2442961_20
          See other OLIG2 GT Assays ›
          SNP ID:
          rs1059004
          Gene
          OLIG2
          Gene Name
          oligodendrocyte lineage transcription factor 2
          Set Membership:
          -
          Chromosome Location:
          Chr.21: 33028155 - 33028155 on Build GRCh38
          Polymorphism:
          C/A, Transversion substitution
          Context Sequence [VIC/FAM]:

          ACTAGAACTCATCCGACCCCCGACC[C/A]CCACCTCCGGGAAAAGATTCTAAAA

          Assay ID C___2442961_20
          Size
          Availability Made To Order
          Catalog # 4351379
          Price
          Your Price
          Online offer:
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details



          Species:

          Human

          dbSNP Submissions:

          NA

          Phenotype:

          MIM: 606386

          Literature Links:

          OLIG2 PubMed Links

          Allele Nomenclature:

          Minor Allele Frequency:

          1000Genome Applied Biosystems® HapMap
          Global
          A (0.32)
          (0.68)
          Caucasian - Not Available CEPH (CEU) - Not Available
          EAS
          A (0.17)
          (0.83)
          African American - Not Available YRI (Yoruba) - Not Available
          SAS
          A (0.43)
          (0.57)
          Chinese - Not Available CHB (Han Chinese) - Not Available
          AFR
          A (0.09)
          (0.91)
          Japanese - Not Available JPT (Japanese) - Not Available
          EUR
          C (0.44)
          (0.56)
          AMR
          A (0.49)
          (0.51)
          OLIG2 - oligodendrocyte lineage transcription factor 2
          Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
          NM_005806.3 1681 UTR 3 NP_005797.1
          XM_005260908.1 1681 UTR 3 XP_005260965.1

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          More Information


          Panther Classification:

          Molecular Function -

          basic helix-loop-helix transcription factor

          Gene Ontology Categories:

          Function(s) Process(es)

          negative regulation of transcription from RNA polymerase II promoter
          transcription, DNA-templated
          spinal cord motor neuron differentiation
          spinal cord oligodendrocyte cell fate specification
          thalamus development
          myelination
          negative regulation of neuron differentiation
          neuron fate commitment
          positive regulation of oligodendrocyte differentiation
          DNA binding
          transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
          protein homodimerization activity
          HMG box domain binding

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