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See other CYP2B6 GT Assays ›
SNP ID:
rs3745274
Gene
CYP2B6
Gene Name
Set Membership:
> HapMap > DME > Validated > Inventoried
Chromosome Location:
Chr.19: 41006936 - 41006936 on Build GRCh38
Polymorphism:
G/T, Transversion substitution
Context Sequence [VIC/FAM]:

TCATGGACCCCACCTTCCTCTTCCA[G/T]TCCATTACCGCCAACATCATCTGCT

Assay ID C___7817765_C0
Size 150 rxns
Availability Inventoried
Catalog # 4362691
Price
Your Price
Online offer:
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Assay Details



Species:

 Human

dbSNP Submissions:

 NA

Phenotype:

 MIM: 123930

Literature Links:

 CYP2B6 PubMed Links

Allele Nomenclature:

 CYP2B6*13A,c.516G>T CYP2B6*13A,g.15631G>T CYP2B6*13B,c.516G>T CYP2B6*13B,g.15631G>T CYP2B6*19,c.516G>T CYP2B6*19,g.15631G>T CYP2B6*20,c.516G>T CYP2B6*20,g.15631G>T CYP2B6*6A,c.516G>T CYP2B6*6A,g.15631G>T CYP2B6*6B,c.516G>T CYP2B6*6B,g.15631G>T CYP2B6*6C,c.516G>T CYP2B6*6C,g.15631G>T CYP2B6*7A,c.516G>T CYP2B6*7A,g.15631G>T CYP2B6*7B,c.516G>T CYP2B6*7B,g.15631G>T CYP2B6*9,c.516G>T CYP2B6*9,g.15631G>T

Minor Allele Frequency:
1000Genome Applied Biosystems® HapMap
Global
T (0.32)
(0.68)
Caucasian
T (0.17)
(0.83)
CEPH (CEU)
T (0.27)
(0.73)
EAS
T (0.22)
(0.78)
Caucasian
T (0.17)
(0.83)
YRI (Yoruba)
T (0.42)
(0.58)
SAS
T (0.38)
(0.62)
African American
T (0.42)
(0.58)
JPT (Japanese)
T (0.18)
(0.82)
AFR
T (0.37)
(0.63)
African American
T (0.42)
(0.58)
CHB (Han Chinese)
T (0.15)
(0.85)
EUR
T (0.24)
(0.76)
Japanese
T (0.18)
(0.82)
AMR
T (0.37)
(0.63)
Japanese
T (0.18)
(0.82)
Chinese
T (0.30)
(0.70)
Chinese
T (0.30)
(0.70)
CYP2B6 - cytochrome P450 family 2 subfamily B member 6
Transcript Accession SNP Location SNP Type Observed Codons Observed Amino Acid Protein ID
NM_000767.4 619 Silent Mutation CAG,CAT Q,H 172 NP_000758.1
XM_005258569.4 619 Silent Mutation CAG,CAT Q,H 172 XP_005258626.1
XM_006723050.3 619 Silent Mutation CAG,CAT Q,H 172 XP_006723113.1
XM_011526546.2 619 Silent Mutation CAG,CAT Q,H 172 XP_011524848.1
XM_011526547.2 619 Intron XP_011524849.1
XM_011526548.2 619 Intron XP_011524850.1
XM_011526549.2 619 Intron XP_011524851.1
XM_011526550.2 619 Intron XP_011524852.1

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More Information


Important Information

Assay C___7817765_C0 to CYP2B6*6 c.516G>T rs3745274 replaces C___7817765_60. C___7817765_C0 demonstrates superior amplification and cluster separation on OpenArray, and also works well on 96- or 384-well plates when run with Genotyping Master Mix. If using Universal Master Mix, use C___7817765_60 as C___7817765_C0 does not amplify well with Universal Master Mix. C___7817765_60 is discontinued but can still be ordered, if needed.

Set Membership:

 HapMap DME Validated Inventoried

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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