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- SNP ID:
- rs10204525
- Gene
-
PDCD1 - Gene Name
- Set Membership:
- > HapMap
- Chromosome Location:
- Chr.2: 241850169 - 241850169 on Build GRCh38
- Polymorphism:
- C/T, Transition substitution
- Context Sequence [VIC/FAM]:
CCAAGGAGAGCTCCCAGGGTGGGCA[C/T]ATGGGGGGCCCTAGGTGCCTGCACT
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||||||||||||||||||||||||||||||||
dbSNP Submissions: |
NA
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Phenotype: |
MIM: 600244
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Literature Links: |
PDCD1 PubMed Links | ||||||||||||||||||||||||||||||||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap | ||||||
|---|---|---|---|---|---|---|---|---|
Global
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Caucasian - Not Available | CEPH (CEU)
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EAS
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African American - Not Available | YRI (Yoruba)
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SAS
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Chinese - Not Available | JPT (Japanese)
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AFR
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Japanese - Not Available | CHB (Han Chinese)
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EUR
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AMR
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| PDCD1 - programmed cell death 1 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_005018.2 | 1823 | UTR 3 | NP_005009.2 | |||
| XM_006712573.2 | 1823 | Intron | XP_006712636.1 | |||
| XM_017004293.1 | 1823 | UTR 3 | XP_016859782.1 | |||
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