Assay Details

Gene Symbol: SNX27
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_030918.5	NP_112180.4	6 - 7	1002		129
	XM_005245509.2	XP_005245566.1	6 - 7	1124		129
	XM_005245510.3	XP_005245567.1	6 - 7	734		129
	XM_005245511.4	XP_005245568.1	6 - 7	1030		129
	XM_011510024.2	XP_011508326.1	5 - 6	845		129
	XM_011510025.2	XP_011508327.1	5 - 6	703		129
	XM_011510026.2	XP_011508328.1	6 - 7	1098		129
	XM_017002417.1	XP_016857906.1	5 - 6	703		129
GenBank mRNA	AB007957.2	-	6 - 7	971		129
	AY044866.1	-	5 - 6	707		129
	BC012184.1	-	6 - 7	992		129
	BC051817.1	-	3 - 4	251		129
	BC071825.1	-	5 - 6	465		129
	BC100998.1	-	6 - 7	1002	40006277	129
	BC100999.1	-	6 - 7	1000	40006279	129
	BC101000.1	-	6 - 7	1002	40006281	129
	BC101822.1	-	6 - 7	1037	8069328	129
	BC101824.1	-	6 - 7	1037	8069330	129
	BC107862.1	-	4 - 5	458		129

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100009965.hg
This assay targets the same location as HTA transcript cluster(s) TC01001214.hg

Additional Information:

This assay is in the 5'UTR region of the BC012184.1 transcripts.

Set Membership:

Ambion siRNA available

Amplicon length greater than or equal to 101

3' Most

Mammalian Gene Collection

Homo sapiens

Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SNX27

Panther Classification:

Molecular Function -

scaffold/adaptor protein

Gene Ontology Categories:

Function(s) Process(es)

MicroArray Probes:

Affymetrix

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01018855.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01018855.hg.1	ENST00000368843.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01018855.hg.1	ENST00000458013.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01018855.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01018855.hg.1	NM_030918.5	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01018855.hg.1	TC01001214.hg.1	HTA TC
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	TC0100009965.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	ENST00000368838.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	ENST00000368841.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	ENST00000368843.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	ENST00000458013.6	Ensembl
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	ENST00000482791.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	NM_030918.5	Refseq
Affymetrix Human Clariom D Assay	PSR0100172272.hg.1	TC0100009965.hg.1	Clariom D TC

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Genomic Map