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- Gene Symbol:
-
CD44 - Gene Name:
- CD44 molecule (IN blood group)
- Gene Aliases:
- CDW44, CSPG8, ECM-III, ECMR-III, H-CAM, HCELL, HUTCH-1, HUTCH-I, Hermes-1, LHR, MC56, MDU2, MDU3, MIC4, Pgp1
- Chromosome Location:
- Chr.11: 35139171 - 35232402 on Build GRCh38
- Species:
- Human
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: CD44 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001001392.2 | NP_001001392.1 | 2 - 3 | 361 | 74 | |
| GenBank mRNA | AF098641.1 | - | 2 - 3 | 246 | 74 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC1100007273.hg.1This assay targets the same location as HTA transcript cluster(s) TC11000332.hg.1
Set Membership: |
Ambion siRNA available
Amplicon length between 71 and 85
Homo sapiens
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
inflammatory response
cell adhesion
cell-matrix adhesion
anatomical structure morphogenesis
cell migration
cytokine-mediated signaling pathway
hyaluronan catabolic process
positive regulation of heterotypic cell-cell adhesion
T cell activation
regulation of apoptotic process
negative regulation of apoptotic process
negative regulation of DNA damage response, signal transduction by p53 class mediator
wound healing, spreading of cells
cellular response to fibroblast growth factor stimulus
system development
cartilage development
positive regulation of ERK1 and ERK2 cascade
monocyte aggregation
cell-cell adhesion
positive regulation of monocyte aggregation
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
regulation of lamellipodium morphogenesis
transmembrane signaling receptor activity
cytokine receptor activity
protein binding
collagen binding
hyaluronic acid binding
inflammatory response
cell adhesion
cell-matrix adhesion
anatomical structure morphogenesis
cell migration
cytokine-mediated signaling pathway
hyaluronan catabolic process
positive regulation of heterotypic cell-cell adhesion
T cell activation
regulation of apoptotic process
negative regulation of apoptotic process
negative regulation of DNA damage response, signal transduction by p53 class mediator
wound healing, spreading of cells
cellular response to fibroblast growth factor stimulus
system development
cartilage development
positive regulation of ERK1 and ERK2 cascade
monocyte aggregation
cell-cell adhesion
positive regulation of monocyte aggregation
negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator
regulation of lamellipodium morphogenesis
transmembrane signaling receptor activity
cytokine receptor activity
protein binding
collagen binding
hyaluronic acid binding
MicroArray Probes:
Affymetrix
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000263398.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000278386.6 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000352818.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000360158.4 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000415148.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000428726.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000433354.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000433892.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000434472.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000437706.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | ENST00000449691.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | NM_000610.3 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | NM_001001389.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | NM_001001390.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | NM_001001391.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | NM_001001392.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | NM_001202555.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | NM_001202556.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | NM_001202557.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR11004284.hg.1 | TC11000332.hg.1 | HTA TC |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000263398.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000278386.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000279452.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000352818.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000415148.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000425428.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000428726.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000433892.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000434472.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000442151.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000525211.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000526000.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000526025.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000526669.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000527889.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000528086.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000531118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_000610.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001001389.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001001390.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001001391.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001001392.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001202555.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001202556.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001202557.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000263398.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000278386.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000279452.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000352818.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000415148.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000425428.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000428726.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000433892.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000434472.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000442151.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000525211.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000526000.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000526025.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000526669.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000527889.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000528086.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | ENST00000531118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_000610.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001001389.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001001390.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001001391.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001001392.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001202555.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001202556.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | NM_001202557.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151301.hg.1 | TC1100007273.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000263398.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000278386.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000279452.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000352818.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000415148.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000425428.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000428726.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000433892.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000434472.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000442151.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000525211.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000526000.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000526025.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000526669.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000527889.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000528086.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000528455.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000531118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_000610.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001001389.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001001390.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001001391.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001001392.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001202555.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001202556.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001202557.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000263398.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000278386.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000279452.10 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000352818.8 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000415148.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000425428.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000428726.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000433892.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000434472.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000442151.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000525211.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000526000.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000526025.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000526669.6 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000527889.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000528086.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000528455.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | ENST00000531118.5 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_000610.3 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001001389.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001001390.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001001391.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001001392.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001202555.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001202556.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | NM_001202557.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR1100151302.hg.1 | TC1100007273.hg.1 | Clariom D TC |
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