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          • Home
          • › Search Tool
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          • › Mm00802300_m1
          See other COL3A1 GE Assays ›
          Gene Symbol:
          Col3a1
          Gene Name:
          collagen, type III, alpha 1
          Gene Aliases:
          AW550625, Col3a-1, MMS10-W, Ms10w, mKIAA4231
          Chromosome Location:
          Chr.1: 45311538 - 45349706 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm00802300_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Col3a1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_009930.2 NP_034060.2 20 - 21 1663 88
          GenBank mRNA AK029212.1 - 20 - 21 1566 88
          AK041115.1 - 20 - 21 1571 88
          AK048546.1 - 20 - 21 1571 88
          AK147542.1 - 20 - 21 1569 88
          AK157762.1 - 20 - 21 1571 88
          AK159763.1 - 20 - 21 1571 88
          AK159920.1 - 20 - 21 1571 88
          AK159985.1 - 20 - 21 1571 88
          AK160048.1 - 20 - 21 1571 88
          AK160107.1 - 20 - 21 1570 88
          AK160818.1 - 20 - 21 1571 88
          AK220558.1 - 20 - 21 1586 88
          BC013626.1 - 11 - 12 723 88
          BC028248.1 - 11 - 12 727 88
          BC043089.1 - 20 - 21 1538 6418299 88
          BC052398.1 - 20 - 21 1555 5720872 88
          BC058724.1 - 20 - 21 1572 5705762 88

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0100000343.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Mammalian Gene Collection Recommended Assay Mus musculus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Col3a1

          Panther Classification:

          Molecular Function -

          extracellular matrix structural protein

          Gene Ontology Categories:

          Function(s) Process(es)

          blood vessel development
          cell-matrix adhesion
          transforming growth factor beta receptor signaling pathway
          integrin-mediated signaling pathway
          heart development
          response to radiation
          peptide cross-linking
          cerebral cortex development
          collagen fibril organization
          response to cytokine
          positive regulation of Rho protein signal transduction
          wound healing
          extracellular fibril organization
          skin development
          digestive tract development
          negative regulation of immune response
          aorta smooth muscle tissue morphogenesis
          cellular response to amino acid stimulus
          negative regulation of neuron migration
          integrin binding
          extracellular matrix structural constituent
          SMAD binding
          metal ion binding
          platelet-derived growth factor binding

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