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          • Home
          • › Search Tool
          • › Search Results
          • › Mm01222447_m1
          See other CLOCK GE Assays ›
          Gene Symbol:
          Clock
          Gene Name:
          circadian locomotor output cycles kaput
          Gene Aliases:
          5330400M04Rik, KAT13D
          Chromosome Location:
          Chr.5: 76209868 - 76305007 on Build GRCm38
          Species:
          Mouse
          Species Specific ID (Flybase ID):
          -
          Assay ID Mm01222447_m1
          Size
          Availability Made To Order
          Catalog # 4351372
          Price 4,430.00
          Your Price
          Online offer:
          4430.0
          Check your price ›
          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Clock
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_001289826.1 NP_001276755.1 8 - 9 779 132
          NM_007715.6 NP_031741.1 8 - 9 822 132
          GenBank mRNA AB221635.1 - 5 - 6 434 132
          AF000998.1 - 8 - 9 822 132
          AK040337.1 - 8 - 9 760 132
          AK129118.1 - 8 - 9 779 132
          BC129886.1 - 6 - 7 531 132

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          More Information


          Updated Mapping Information

          This assay targets the same location as MTA transcript cluster(s) TC0500002628.mm.1

          Set Membership:

          Ambion siRNA available Amplicon length greater than or equal to 101 Mammalian Gene Collection Mus musculus Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Clock

          Gene Ontology Categories:

          Function(s) Process(es)

          DNA damage checkpoint
          transcription, DNA-templated
          regulation of transcription, DNA-templated
          transcription from RNA polymerase II promoter
          cellular response to DNA damage stimulus
          signal transduction
          spermatogenesis
          circadian rhythm
          histone acetylation
          circadian regulation of gene expression
          regulation of hair cycle
          proteasome-mediated ubiquitin-dependent protein catabolic process
          negative regulation of transcription, DNA-templated
          positive regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          rhythmic process
          positive regulation of inflammatory response
          regulation of insulin secretion
          positive regulation of NF-kappaB transcription factor activity
          response to redox state
          cellular response to ionizing radiation
          regulation of type B pancreatic cell development
          negative regulation of glucocorticoid receptor signaling pathway
          RNA polymerase II core promoter proximal region sequence-specific DNA binding
          transcription factor activity, RNA polymerase II core promoter proximal region sequence-specific binding
          core promoter sequence-specific DNA binding
          core promoter binding
          transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
          transcriptional activator activity, RNA polymerase II transcription factor binding
          DNA binding
          transcription factor activity, sequence-specific DNA binding
          histone acetyltransferase activity
          signal transducer activity
          protein binding
          transcription factor binding
          transferase activity
          transferase activity, transferring acyl groups
          chromatin DNA binding
          sequence-specific DNA binding
          protein dimerization activity
          E-box binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Mouse Clariom S Array PSR0500023250.mm.1 NM_001289826.1 Refseq
          Affymetrix Mouse Clariom S Array PSR0500023250.mm.1 NM_007715.6 Refseq
          Affymetrix Mouse Clariom S Array PSR0500023250.mm.1 TC0500002628.mm.1 MTA TC

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