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- Gene Symbol:
-
Safb - Gene Name:
- scaffold attachment factor B
- Gene Aliases:
- 3110021E02Rik, 5330423C17Rik, AU018122, D18386, E130307D12, HAP, HET, SAF-B1, SAFB1
- Chromosome Location:
- Chr.17: 56584760 - 56606294 on Build GRCm38
- Species:
- Mouse
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Safb | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_001163300.1 | NP_001156772.1 | 17 - 18 | 2580 | 57 | |
| GenBank mRNA | AK087504.1 | - | 10 - 11 | 3040 | 57 | |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as MTA transcript cluster(s) TC1700001010.mm.1Set Membership: |
Amplicon length less than or equal to 70
Recommended Assay
Mus musculus
1700
Inventoried
Probe spans exons
|
Gene Ontology Categories:
Function(s)
Process(es)
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
intracellular estrogen receptor signaling pathway
growth
hormone metabolic process
positive regulation of transcription from RNA polymerase II promoter
regulation of mRNA processing
nucleotide binding
core promoter binding
nucleic acid binding
DNA binding
chromatin binding
RNA binding
protein binding
protein kinase binding
sequence-specific DNA binding
poly(A) RNA binding
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
intracellular estrogen receptor signaling pathway
growth
hormone metabolic process
positive regulation of transcription from RNA polymerase II promoter
regulation of mRNA processing
nucleotide binding
core promoter binding
nucleic acid binding
DNA binding
chromatin binding
RNA binding
protein binding
protein kinase binding
sequence-specific DNA binding
poly(A) RNA binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_66_P139167 | AK087504.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_66_P139167 | BC024443.1 | mouse_transcriptome |
| Agilent Whole Mouse Genome Microarray 4x44K v2 | A_66_P139167 | NM_001163300.1 | mouse_transcriptome |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 462221 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 931017 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 121724 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 954553 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 198479 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 765858 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 430463 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 514603 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 554745 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 121936 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 872990 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 750361 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 725279 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 1x1M | 588980 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 152807 | - | - |
| Agilent SurePrint G3 Mouse CGH Microarray 4x180K | 79930 | - | - |
| Agilent Mouse Genome CGH Microarray 44K G4426B | A_53_P100281 | - | - |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_66_P139167 | AK087504.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_66_P139167 | BC024443.1 | mouse_transcriptome |
| SurePrint G3 Mouse Gene Expression Microarray G4852A | A_66_P139167 | NM_001163300.1 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P08811835 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P03339920 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_53_P100281 | - | - |
| Agilent Mouse Genome CGH Microarray 244A (G4415A) | A_67_P08811901 | - | - |
| Whole Mouse Genome G4122A | A_51_P236287 | AK087504.1 | mouse_transcriptome |
| Whole Mouse Genome G4122A | A_51_P236287 | NM_001163300.1 | mouse_transcriptome |
| Agilent Mouse Genome CGH Microarray 105A (G4416A) | A_53_P100281 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13205745 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257154 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257162 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257168 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13205747 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257155 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257165 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257159 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257153 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257164 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257167 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P13139597 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257163 | - | - |
| Agilent Six_ChIP_03_of_03_v2 | A_68_P31257171 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT MG-430 PM Array Plate | 1454929_PM_s_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1432911_PM_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1454415_PM_at | - | - |
| Affymetrix HT MG-430 PM Array Plate | 1454928_PM_at | - | - |
| Affymetrix Mouse Gene 1.1 ST Array | 10446109 | - | - |
| Mouse Genome 430 2.0 Array | 1454415_at | - | - |
| Mouse Genome 430 2.0 Array | 1454928_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1454929_s_at | - | - |
| Mouse Genome 430 2.0 Array | 1454928_at | - | - |
| Mouse Genome 430 2.0 Array | 1432911_at | - | - |
| Mouse Genome 430 2.0 Array | 1432911_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1454415_PM_at | - | - |
| Mouse Genome 430 2.0 Array | 1454929_PM_s_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 224903_at | - | - |
| Affymetrix GeneChip Mouse Genome 430 2.0 Array | 224903_PM_at | - | - |
| Affymetrix Mouse Clariom S Array | PSR1700009702.mm.1 | NM_001163300.1.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1700009702.mm.1 | NM_001163300.1 | Refseq |
| Affymetrix Mouse Clariom S Array | PSR1700009702.mm.1 | TC1700001010.mm.1 | MTA TC |
| Mouse Expression Set 430 | 1454929_s_at | - | - |
| Mouse Expression Set 430 | 1454928_at | - | - |
| Mouse Expression Set 430 | 1454928_PM_at | - | - |
| Mouse Expression Set 430 | 1454929_PM_s_at | - | - |
| Mouse Expression Set 430 | 1454415_at | - | - |
| Mouse Expression Set 430 | 1454415_PM_at | - | - |
| Mouse Expression Set 430 | 1432911_at | - | - |
| Mouse Expression Set 430 | 1432911_PM_at | - | - |
| Murine Genome U74v2 Set | 94413_at | - | - |
| Murine Genome U74v2 Set | 94413_PM_at | - | - |
| Mouse Genome 430A 2.0 Array | 1454929_PM_s_at | - | - |
| Mouse Genome 430A 2.0 Array | 1454929_s_at | - | - |
| Mouse Genome 430A 2.0 Array | 1454928_at | - | - |
| Mouse Genome 430A 2.0 Array | 1454928_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1454929_s_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1454928_PM_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1454929_PM_s_at | - | - |
| Affymetrix HT Mouse Genome 430A Array | 1454928_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1432911_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1454415_PM_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1454415_at | - | - |
| Affymetrix HT Mouse Genome 430B Array | 1432911_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Mouse Genome Survey Microarray | 721089 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_1246078 | - | - |
| Illumina mouseRef-8 v1.1 expression beadchip | ILMN_2673274 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_2673274 | - | - |
| Illumina mouse-6 v1.1 expression beadchip | ILMN_1246078 | - | - |
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