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          • Home
          • › Search Tool
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          • › Rn00680265_m1
          See other P4HA1 GE Assays ›
          Gene Symbol:
          P4ha1
          Gene Name:
          prolyl 4-hydroxylase, alpha polypeptide I
          Gene Aliases:
          PHalphaI
          Chromosome Location:
          Chr.20: 28920616 - 28972576 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn00680265_m1
          Best Coverage
          Size
          Availability Inventoried
          Catalog # 4331182
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: P4ha1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_172062.2 NP_742059.2 12 - 13 1598 65
          XM_006256424.2 XP_006256486.1 13 - 14 1683 65
          XM_006256425.2 XP_006256487.1 12 - 13 1592 65
          GenBank mRNA BC078703.1 - 12 - 13 1598 7115543 65
          X78949.1 - 12 - 13 1432 65

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC2000000646.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length less than or equal to 70 Mammalian Gene Collection Recommended Assay Rattus norvegicus Inventoried Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene P4ha1

          Panther Classification:

          Molecular Function -

          protein modifying enzyme

          Gene Ontology Categories:

          Function(s) Process(es)

          peptidyl-proline hydroxylation to 4-hydroxy-L-proline
          peptidyl-proline hydroxylation
          collagen fibril organization
          oxidation-reduction process
          procollagen-proline 4-dioxygenase activity
          iron ion binding
          oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
          L-ascorbic acid binding

          MicroArray Probes:

          Agilent Affymetrix Illumina

          Array Name Probe IDs Targets Target Type
          Agilent Whole Rat Genome Microarray 4x44K v2 A_44_P412170 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P412170 - -
          Agilent Whole Rat Genome Microarray 4x44K v3 A_44_P412170 - -
          Agilent SurePrint G3 Rat GE 8x60K Microarray A_44_P412170 - -
          SurePrint G3 Rat Gene Expression Microarray G4131A A_44_P412170 - -
          Matsumoto (Agilent Rat cDNA Microarray G4105A) 702128720 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 67438 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 21990 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 7156 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 54706 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 31810 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 75312 - -
          Agilent Rat Genome CGH Microarray 105A (G4436A) 70360 - -
          Agilent Rat cDNA Microarray (G4105A) 702128720 - -
          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Gene 1.0 ST Array 10931310 - -
          Affymetrix Rat Gene 1.0 ST Array 10931314 - -
          Affymetrix Rat Gene 1.0 ST Array 10931324 - -
          Affymetrix Rat Gene 1.0 ST Array 10931313 - -
          Affymetrix Rat Gene 1.0 ST Array 10931309 - -
          Affymetrix Rat Gene 1.0 ST Array 10931312 - -
          Affymetrix Rat Gene 1.0 ST Array 10931311 - -
          Affymetrix Rat Gene 1.0 ST Array 10931320 - -
          Affymetrix Rat Gene 1.0 ST Array 10931323 - -
          Affymetrix Rat Gene 1.0 ST Array 10931317 - -
          Affymetrix Rat Gene 1.0 ST Array 10931322 - -
          Affymetrix Rat Gene 1.0 ST Array 10931321 - -
          Affymetrix Rat Gene 1.0 ST Array 10931318 - -
          Affymetrix Rat Gene 1.0 ST Array 10931315 - -
          Affymetrix Rat Gene 1.0 ST Array 10931319 - -
          Affymetrix Rat Gene 1.1 ST Array 10931308 - -
          Rat Genome 230 2.0 Array 1370954_at - -
          Rat Genome 230 2.0 Array 1370954_PM_at - -
          Affymetrix HT Rat Focus Array 1370954_at - -
          Affymetrix HT Rat Focus Array 1370954_PM_at - -
          Affymetrix Rat Clariom S Assay PSR2000005680.rn.1 TC2000000646.rn.1 RTA TC
          Rat Expression Set 230 1370954_at - -
          Rat Expression Set 230 1370954_PM_at - -
          Affymetrix Rat Gene 1.0 ST Array 10931308 - -
          Rat Genome U34 Set X78949_at - -
          Rat Genome U34 Set rc_AI231310_at - -
          Array Name Probe IDs Targets Target Type
          Illumina ratRef-12 v1.0 expression beadchip ILMN_1368381 - -
          RatRef-12 Expression BeadChip ILMN_50336 - -

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