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          • Home
          • › Search Tool
          • › Search Results
          • › Rn01644551_m1
          See other BRCA1 GE Assays ›
          Gene Symbol:
          Brca1
          Gene Name:
          breast cancer 1, early onset
          Gene Aliases:
          -
          Chromosome Location:
          Chr.10: 89394821 - 89455009 on Build Rnor_6.0
          Species:
          Rat
          Species Specific ID (Flybase ID):
          -
          Assay ID Rn01644551_m1
          Size
          Availability Made To Order
          Catalog # 4351372
          Price 435.00
          Your Price
          Online offer: 408.65
          408.65
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Gene Symbol: Brca1
          Interrogated Sequence Translated Protein Exon Boundary Assay Location IMAGE Clone ID Amplicon Length
          RefSeq NM_012514.1 NP_036646.1 3 - 4 258 98
          XM_008768092.1 XP_008766314.1 3 - 4 474 98
          GenBank mRNA AF036760.1 - 3 - 4 258 98
          U60523.1 - 2 - 3 122 98

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          More Information


          Updated Mapping Information

          This assay targets the same location as RTA transcript cluster(s) TC1000003834.rn.1

          Set Membership:

          Ambion siRNA available Amplicon length between 86 and 100 Rattus norvegicus Probe spans exons

          Matching Ambion siRNAs:

          Click here to find siRNAs for Gene Brca1

          Panther Classification:

          Molecular Function -

          ubiquitin-protein ligase protein modifying enzyme

          Gene Ontology Categories:

          Function(s) Process(es)

          double-strand break repair via homologous recombination
          DNA replication
          postreplication repair
          double-strand break repair
          regulation of gene expression by genetic imprinting
          fatty acid biosynthetic process
          cellular response to DNA damage stimulus
          chromosome segregation
          centrosome cycle
          brain development
          response to nutrient
          intrinsic apoptotic signaling pathway in response to DNA damage
          dosage compensation by inactivation of X chromosome
          response to organic substance
          response to ionizing radiation
          positive regulation of vascular endothelial growth factor production
          positive regulation of gene expression
          protein ubiquitination
          positive regulation of protein ubiquitination
          response to estradiol
          response to lipid
          positive regulation of histone acetylation
          negative regulation of histone acetylation
          regulation of cell proliferation
          chordate embryonic development
          response to estrogen
          regulation of DNA methylation
          negative regulation of fatty acid biosynthetic process
          positive regulation of DNA repair
          positive regulation of angiogenesis
          negative regulation of transcription, DNA-templated
          positive regulation of transcription from RNA polymerase II promoter
          positive regulation of histone H3-K4 methylation
          negative regulation of histone H3-K4 methylation
          negative regulation of histone H3-K9 methylation
          positive regulation of histone H3-K9 methylation
          protein autoubiquitination
          positive regulation of histone H4-K20 methylation
          positive regulation of cell cycle arrest
          cellular response to tumor necrosis factor
          cellular response to indole-3-methanol
          protein K6-linked ubiquitination
          negative regulation of extrinsic apoptotic signaling pathway via death domain receptors
          regulation of cell motility
          negative regulation of reactive oxygen species metabolic process
          positive regulation of histone H3-K9 acetylation
          positive regulation of histone H4-K16 acetylation
          DNA binding
          damaged DNA binding
          RNA binding
          ubiquitin-protein transferase activity
          zinc ion binding
          ligase activity
          enzyme binding
          ubiquitin protein ligase binding
          transcription regulatory region DNA binding

          MicroArray Probes:

          Affymetrix

          Array Name Probe IDs Targets Target Type
          Affymetrix Rat Clariom S Assay PSR1000034542.rn.1 TC1000003834.rn.1 RTA TC
          Affymetrix Rat Clariom S Assay PSR1000034543.rn.1 TC1000003834.rn.1 RTA TC

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