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- Gene Symbol:
-
Myocd - Gene Name:
- myocardin
- Gene Aliases:
- Mycd
- Chromosome Location:
- Chr.10: 51683534 - 51781427 on Build Rnor_6.0
- Species:
- Rat
- Species Specific ID (Flybase ID):
- -
Genomic Map
Back To TopAssay Details
| Gene Symbol: Myocd | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_182667.2 | NP_872608.1 | 12 - 13 | 2494 | 99 | |
| XM_006246582.2 | XP_006246644.1 | 13 - 14 | 5079 | 99 | ||
| XM_006246583.2 | XP_006246645.1 | 14 - 15 | 5123 | 99 | ||
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC1000003014.rn.1Set Membership: |
Ambion siRNA available
Amplicon length between 86 and 100
Protein Kinase
3' Most
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Panther Classification:
Gene Ontology Categories:
Function(s)
Process(es)
negative regulation of transcription from RNA polymerase II promoter
regulation of cell growth by extracellular stimulus
vasculogenesis
response to hypoxia
cardiac ventricle development
positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
heart development
positive regulation of cell proliferation
negative regulation of cell proliferation
negative regulation of cardiac muscle cell apoptotic process
negative regulation of myotube differentiation
positive regulation of transforming growth factor beta receptor signaling pathway
regulation of histone acetylation
hepatic stellate cell activation
muscle cell differentiation
positive regulation of DNA binding
cellular component maintenance
regulation of myoblast differentiation
negative regulation of cyclin-dependent protein serine/threonine kinase activity
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of smooth muscle contraction
lung alveolus development
digestive tract development
positive regulation of sequence-specific DNA binding transcription factor activity
smooth muscle cell differentiation
regulation of smooth muscle cell differentiation
positive regulation of smooth muscle cell differentiation
cardiac muscle cell differentiation
ventricular cardiac muscle cell differentiation
uterus development
urinary bladder development
cell growth involved in cardiac muscle cell development
cellular response to growth factor stimulus
cellular response to hypoxia
ductus arteriosus closure
negative regulation of beta-amyloid clearance
positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation
positive regulation of cardiac vascular smooth muscle cell differentiation
positive regulation of cardiac muscle cell differentiation
negative regulation of skeletal muscle cell differentiation
core promoter sequence-specific DNA binding
transcription factor activity, RNA polymerase II transcription factor binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
molecular_function
transcription coactivator activity
protein binding
transcription factor binding
histone acetyltransferase binding
histone deacetylase binding
R-SMAD binding
negative regulation of transcription from RNA polymerase II promoter
regulation of cell growth by extracellular stimulus
vasculogenesis
response to hypoxia
cardiac ventricle development
positive regulation of transcription from RNA polymerase II promoter involved in myocardial precursor cell differentiation
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
heart development
positive regulation of cell proliferation
negative regulation of cell proliferation
negative regulation of cardiac muscle cell apoptotic process
negative regulation of myotube differentiation
positive regulation of transforming growth factor beta receptor signaling pathway
regulation of histone acetylation
hepatic stellate cell activation
muscle cell differentiation
positive regulation of DNA binding
cellular component maintenance
regulation of myoblast differentiation
negative regulation of cyclin-dependent protein serine/threonine kinase activity
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of smooth muscle contraction
lung alveolus development
digestive tract development
positive regulation of sequence-specific DNA binding transcription factor activity
smooth muscle cell differentiation
regulation of smooth muscle cell differentiation
positive regulation of smooth muscle cell differentiation
cardiac muscle cell differentiation
ventricular cardiac muscle cell differentiation
uterus development
urinary bladder development
cell growth involved in cardiac muscle cell development
cellular response to growth factor stimulus
cellular response to hypoxia
ductus arteriosus closure
negative regulation of beta-amyloid clearance
positive regulation of transcription from RNA polymerase II promoter involved in smooth muscle cell differentiation
positive regulation of cardiac vascular smooth muscle cell differentiation
positive regulation of cardiac muscle cell differentiation
negative regulation of skeletal muscle cell differentiation
core promoter sequence-specific DNA binding
transcription factor activity, RNA polymerase II transcription factor binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
molecular_function
transcription coactivator activity
protein binding
transcription factor binding
histone acetyltransferase binding
histone deacetylase binding
R-SMAD binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_43_P16168 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 606576 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 467210 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 158379 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 594897 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 815938 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 257341 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 758837 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 477621 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 119551 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 913279 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 101913 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 123297 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 719632 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 537404 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 846193 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 963750 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 300293 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 423855 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 272954 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 872130 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 923020 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 850769 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 263737 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 539567 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 357961 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 662902 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 787475 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 56999 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 388867 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 99286 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 457535 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 23845 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 962004 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 288328 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 334913 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 138822 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 410231 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 939268 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 305658 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 678267 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 42437 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 970533 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 586069 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 687670 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 494104 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 428964 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 19620 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 38500 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 612778 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 466916 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 704672 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 972189 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 658471 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 771796 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 674183 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 470165 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 607195 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 42432 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 413802 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 855121 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 845057 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 213434 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 10582 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 326904 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 701568 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 707271 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 169527 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 44625 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 180313 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 77672 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 45421 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 77450 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 34285 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 91874 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 76699 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 29777 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 93134 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P16168 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_43_P16168 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_43_P16168 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P479899 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 17943 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 26314 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 91315 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 12617 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 27012 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 91226 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 93386 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 49622 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10743667 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743666 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743654 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743665 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743656 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743658 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743660 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743655 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743661 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743653 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743659 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743664 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743662 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10743652 | - | - |
| Rat Genome 230 2.0 Array | 1385125_at | - | - |
| Rat Genome 230 2.0 Array | 1385125_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1385125_at | - | - |
| Affymetrix HT Rat Focus Array | 1385125_PM_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR1000026571.rn.1 | TC1000003014.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR1000026570.rn.1 | TC1000003014.rn.1 | RTA TC |
| Rat Expression Set 230 | 1385125_at | - | - |
| Rat Expression Set 230 | 1385125_PM_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10743652 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21937963 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1361164 | - | - |
| RatRef-12 Expression BeadChip | ILMN_51696 | - | - |
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