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- SNP ID:
- rs146553238
- Gene
-
ARHGAP1ATG13 - Gene Name
- Set Membership:
- -
- Chromosome Location:
- Chr.11: 46668506 - 46668506 on Build GRCh38
- Polymorphism:
- C/T, Transition substitution
- Context Sequence [VIC/FAM]:
TCTCCTGTGTCTCTTCAGGTGACCC[C/T]GACGAGTTTGGATATACCCTTTGCC
Genomic Map
Back To TopAssay Details
Species: |
Human | ||||||||||||||||||||
dbSNP Submissions: |
NA
|
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Phenotype: |
MIM: 602732
MIM: 615088
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Literature Links: |
ARHGAP1 PubMed Links | ||||||||||||||||||||
Allele Nomenclature: |
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Minor Allele Frequency: |
| 1000Genome | Applied Biosystems® | HapMap |
|---|---|---|
| Global - Not Available | Caucasian - Not Available | CEPH (CEU) - Not Available |
| EAS - Not Available | African American - Not Available | YRI (Yoruba) - Not Available |
| SAS - Not Available | Chinese - Not Available | CHB (Han Chinese) - Not Available |
| AFR - Not Available | Japanese - Not Available | JPT (Japanese) - Not Available |
| EUR - Not Available | ||
| AMR - Not Available |
| ARHGAP1 - Rho GTPase activating protein 1 | ||||||
|---|---|---|---|---|---|---|
| There are no transcripts associated with this gene. | ||||||
| ATG13 - autophagy related 13 | ||||||
|---|---|---|---|---|---|---|
| Transcript Accession | SNP Location | SNP Type | Observed Codons | Observed Amino Acid | Protein ID | |
| NM_001142673.2 | 1866 | Missense Mutation | CCG,CTG | P,L 387 | NP_001136145.1 | |
| NM_001205119.1 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | NP_001192048.1 | |
| NM_001205120.1 | 1866 | Missense Mutation | CCG,CTG | P,L 387 | NP_001192049.1 | |
| NM_001205121.1 | 1866 | Missense Mutation | CCG,CTG | P,L 350 | NP_001192050.1 | |
| NM_001205122.1 | 1866 | Missense Mutation | CCG,CTG | P,L 271 | NP_001192051.1 | |
| NM_014741.4 | 1866 | Missense Mutation | CCG,CTG | P,L 350 | NP_055556.2 | |
| XM_005253262.2 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_005253319.1 | |
| XM_005253263.2 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_005253320.1 | |
| XM_005253265.2 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_005253322.1 | |
| XM_005253266.2 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_005253323.1 | |
| XM_005253268.2 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_005253325.1 | |
| XM_006718394.2 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_006718457.1 | |
| XM_006718395.2 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_006718458.1 | |
| XM_006718396.2 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_006718459.1 | |
| XM_011520493.1 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_011518795.1 | |
| XM_011520496.2 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_011518798.1 | |
| XM_011520499.2 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_011518801.1 | |
| XM_011520500.1 | 1866 | Missense Mutation | CCG,CTG | P,L 411 | XP_011518802.1 | |
| XM_011520501.1 | 1866 | Missense Mutation | CCG,CTG | P,L 387 | XP_011518803.1 | |
| XM_011520502.1 | 1866 | Missense Mutation | CCG,CTG | P,L 378 | XP_011518804.1 | |
| XM_011520503.1 | 1866 | Missense Mutation | CCG,CTG | P,L 350 | XP_011518805.1 | |
| XM_017018599.1 | 1866 | Missense Mutation | CCG,CTG | P,L 420 | XP_016874088.1 | |
| XM_017018600.1 | 1866 | Missense Mutation | CCG,CTG | P,L 411 | XP_016874089.1 | |
| XM_017018601.1 | 1866 | Missense Mutation | CCG,CTG | P,L 411 | XP_016874090.1 | |
| XM_017018602.1 | 1866 | Missense Mutation | CCG,CTG | P,L 387 | XP_016874091.1 | |
| XM_017018603.1 | 1866 | Missense Mutation | CCG,CTG | P,L 387 | XP_016874092.1 | |
| XM_017018604.1 | 1866 | Missense Mutation | CCG,CTG | P,L 387 | XP_016874093.1 | |
| XM_017018605.1 | 1866 | Missense Mutation | CCG,CTG | P,L 387 | XP_016874094.1 | |
| XM_017018606.1 | 1866 | Missense Mutation | CCG,CTG | P,L 387 | XP_016874095.1 | |
| XM_017018607.1 | 1866 | Missense Mutation | CCG,CTG | P,L 387 | XP_016874096.1 | |
| XM_017018608.1 | 1866 | Missense Mutation | CCG,CTG | P,L 378 | XP_016874097.1 | |
| XM_017018609.1 | 1866 | Missense Mutation | CCG,CTG | P,L 378 | XP_016874098.1 | |
| XM_017018610.1 | 1866 | Missense Mutation | CCG,CTG | P,L 378 | XP_016874099.1 | |
| XM_017018611.1 | 1866 | Missense Mutation | CCG,CTG | P,L 378 | XP_016874100.1 | |
| XM_017018612.1 | 1866 | Missense Mutation | CCG,CTG | P,L 350 | XP_016874101.1 | |
| XM_017018613.1 | 1866 | Missense Mutation | CCG,CTG | P,L 350 | XP_016874102.1 | |
| XM_017018614.1 | 1866 | Missense Mutation | CCG,CTG | P,L 350 | XP_016874103.1 | |
| XM_017018615.1 | 1866 | Missense Mutation | CCG,CTG | P,L 350 | XP_016874104.1 | |
| XM_017018616.1 | 1866 | Missense Mutation | CCG,CTG | P,L 350 | XP_016874105.1 | |
| XM_017018617.1 | 1866 | Missense Mutation | CCG,CTG | P,L 350 | XP_016874106.1 | |
| XM_017018618.1 | 1866 | Missense Mutation | CCG,CTG | P,L 225 | XP_016874107.1 | |
| XM_017018619.1 | 1866 | Missense Mutation | CCG,CTG | P,L 192 | XP_016874108.1 | |
| XM_017018620.1 | 1866 | Missense Mutation | CCG,CTG | P,L 192 | XP_016874109.1 | |
| XM_017018621.1 | 1866 | Missense Mutation | CCG,CTG | P,L 192 | XP_016874110.1 | |
| XM_017018622.1 | 1866 | Missense Mutation | CCG,CTG | P,L 155 | XP_016874111.1 | |
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