Assay Details

Gene Family ID:

MIPF0000015, MIR399

Mature miRNA Sequence:

UGCCAAAGGAGAUUUGCCCGG

Mature miRNA Details:

Species	miRBase ID	miRBase Accession Number
Arabidopsis	ath-miR399f	MIMAT0000956
Arabidopsis lyrata	aly-miR399a-3p	MIMAT0017572
Arabidopsis lyrata	aly-miR399h-3p	MIMAT0017672
Brachypodium distachyon	bdi-miR399d	MIMAT0035522
Brassica napus	bna-miR399a	MIMAT0004449
Brassica napus	bna-miR399b	MIMAT0023642
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Citrus sinensis	csi-miR399a-3p	MIMAT0018469
Citrus sinensis	csi-miR399e-3p	MIMAT0048934
Cucumis melo	cme-miR399c	MIMAT0026152
Linum usitatissimum	lus-miR399a	MIMAT0027152
Linum usitatissimum	lus-miR399c	MIMAT0027154
Linum usitatissimum	lus-miR399e	MIMAT0027156
Manihot esculenta	mes-miR399b	MIMAT0029280
Manihot esculenta	mes-miR399c	MIMAT0029281
Manihot esculenta	mes-miR399d	MIMAT0029282
Manihot esculenta	mes-miR399g	MIMAT0029285
Populus trichocarpa	ptc-miR399b	MIMAT0002045
Ricinus communis	rco-miR399b	MIMAT0014197
Ricinus communis	rco-miR399c	MIMAT0014198
Theobroma cacao	tcc-miR399b	MIMAT0020436
Theobroma cacao	tcc-miR399d	MIMAT0020438
Vitis vinifera	vvi-miR399e	MIMAT0005730

Stem-loop Details

Arabidopsis

Arabidopsis lyrata

Brachypodium distachyon

Brassica napus

Citrus sinensis

Cucumis melo

Linum usitatissimum

Manihot esculenta

Populus trichocarpa

Ricinus communis

Theobroma cacao

Vitis vinifera

More Information

miRBase Alias:

Arabidopsis lyrata: aly-miR399a (v18)
Arabidopsis lyrata: aly-miR399h (v18)
Arabidopsis lyrata: aly-miR399j (v19)
Brevundimonas naejangsanensis DSM 23858: bna-miR399 (v18)
Citrus sinensis: csi-miR399a (v21)
Oryza sativa: osa-miR399g (v8.1)
Populus trichocarpa: ptc-miR399c (v19)

Assay Name:	ath-miR399f
miRBase Accession Number:	MI0001025
miRBase Version:	v22.1
Chromosome Location:	Chr.2: 14444997 - 14445114 [+] on Build TAIR10.1
Mature miRNA Sequence:	UGCCAAAGGAGAUUUGCCCGG
Species:	Arabidopsis, Arabidopsis lyrata, Brachypodium distachyon, Brassica napus, Citrus sinensis, Cucumis melo, Linum usitatissimum, Manihot esculenta, Populus trichocarpa, Ricinus communis, Theobroma cacao, Vitis vinifera
Product Type:	TaqMan^™ MicroRNA Assay

Availability	Made To Order
Catalog #	4440886
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Stem-loop ID	ath-MIR399f
Stem-loop Accession #	MI0001025
Stem-loop Sequence	AUAUGCAUUACAGGGCAAGAUCACCAUUGGCAGAGAUCUAUUACUUCAUUCUUGCAUCAUAUGCAUAAAUGUUUGUGGUGAGCUCUCUGCCAAAGGAGAUUUGCCCGGUAAUUCUCUU
Chromosome Location	Chr. 2 - 14444997 - 14445114 [+] on Build TAIR10.1
Mature MicroRNA	miRBase Accession #: MIMAT0000956 miRBase ID: ath-miR399f Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCGG Chromosome Location: Chr. 2 - 14444997 - 14445114 [+] on Build TAIR10.1

Stem-loop ID	aly-MIR399a
Stem-loop Accession #	MI0014588
Stem-loop Sequence	CAUGUGAGAUGGAUCAAAGGUGGAAAUGUAUUACAGGGUAAGAUCUCUAUUGGCAGGAAACCAUUACUUAGAUCUUUGCAUCUCUUUAUGCAUUGCUUUUAAGUGAGUUCUCUGCCAAAGGAGAUUUGCCCGGUAAUUCUUCUGCACCAAUAUAUUGAUAUG
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0017572 miRBase ID: aly-miR399a-3p Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCGG Chromosome Location: NA

Stem-loop ID	aly-MIR399h
Stem-loop Accession #	MI0014637
Stem-loop Sequence	AUUACAGGGCAAGAUCUCUAUUGGCAGGAAACCAUUACUUGACCUUUGCAUCUCUUUAUGCAUUGCUUUGUAGUGAGUUCUUGCCAAAGGAGAUUUGCCCGGUAAU
Chromosome Location	-
Mature MicroRNA	miRBase Accession #: MIMAT0017672 miRBase ID: aly-miR399h-3p Mature miRNA Sequence: UGCCAAAGGAGAUUUGCCCGG Chromosome Location: NA

System Message

Genomic Map