Name: [Hs00700717_cn] [MCM3AP]
Creator: Thermo Fisher Scientific
Keywords: [MCM3AP] Assay, [minichromosome maintenance complex component 3 associated protein] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	8888
Gene Name:	minichromosome maintenance complex component 3 associated protein
Gene Aliases:	GANP, MAP80, SAC3
Location:	Chr.21:46235125-46286274 on Build GRCh38
Assay Gene Location:	Within Exon 27

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MCM3AP	NM_003906.4	26	5667	NP_003897.2
	XM_005261203.4	27	6243	XP_005261260.1
	XM_005261204.4	27	6139	XP_005261261.1
	XM_005261205.3	27	5755	XP_005261262.1
	AB005543.1	11	2152	BAA25170.1
	AB011144.1	26	5237	BAA25498.1
	AJ010089.1	26	5596	CAB52687.1
	AK026578.1	5	1010
	AK095181.1	6	2620
	AK126313.1	16	4072
	AK127239.1	16	3556
	AK304208.1	26	4526
	BC004497.2	7	1317	AAH04497.2
	BC013285.2	11	1953	AAH13285.2
	BC104958.1	26	5635	AAI04959.1
	BC104960.1	26	5635	AAI04961.1

Target Gene Details

Entrez Gene ID:	114044
Gene Name:	MCM3AP antisense RNA 1
Gene Aliases:	C21orf85, MCM3AP-AS, MCM3APAS, MCM3APASB, NCRNA00031
Location:	Chr.21:46229231-46251701 on Build GRCh38
Assay Gene Location:	Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location
MCM3AP-AS1	NR_002776.4	2	88
	NR_110565.1	3	289
	NR_110566.1	3	191
	NR_110567.1
	AF426263.1	3	290
	AK001370.1	3	290
	BC059792.1	2	79

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv519904	Chr.21:46163592 - 46461396 on Build GRCh38	Loss	LSS MCM3AP SPATC1L DIP2A C21orf58 MCM3AP-AS1 YBEY PCNT
nsv470910	Chr.21:45933861 - 46665076 on Build GRCh38	Gain	PRMT2 S100B SPATC1L DIP2A C21orf58 LOC101928796 YBEY COL6A2 PCNT LSS MCM3AP COL6A1 FTCD MCM3AP-AS1 DIP2A-IT1 PCBP3
nsv1060978	Chr.21:46068159 - 46413726 on Build GRCh38	Gain	LSS MCM3AP SPATC1L C21orf58 FTCD MCM3AP-AS1 YBEY COL6A2 PCNT