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Gene Symbol
PSORS1C3
Assay Reference Genome
Location

Chr.6:31175519 on build GRCh38
Cytoband
Assay ID Hs03586990_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 100130889

Gene Name:

 psoriasis susceptibility 1 candidate 3

Gene Aliases:

 NCRNA00196

Location:

 Chr.6:2656176-2668769 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
PSORS1C3 NR_026816.2
NR_152828.1
NR_152829.1
NR_152830.1
NR_152831.1
NR_152832.1
NR_152833.1
NR_152834.1
NR_152835.1
NR_152836.1
NR_152837.1
NR_152838.1
NR_152839.1
AB932952.1
AB932953.1
AB932954.1
AB933312.1
AB933313.1
AB933320.1
AB933321.1
AY484516.1 AAS49640.1
LC027944.1
LC027945.1
LC027946.1
LC050979.1
LC050980.1
LC050981.1
LC050982.1
LC050983.1
LC050984.1
LC050985.1
LC050986.1
LC050987.1
LC050988.1
LC050989.1
LC050990.1
LC050991.1
OA988594.1 1 1073
OA988595.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2025-12-01, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2759414 Chr.6:31060513 - 31574531 on Build GRCh38 Gain+Loss POU5F1 SNORD117 PSORS1C3 PSORS1C2 ATP6V1G2 MICA-AS1 DDX39B ATP6V1G2-DDX39B LINC01149 MCCD1 PSORS1C1 MICA TCF19 SNORD84 CDSN HCP5 MICB-DT LINC02571 HCG26 HCG27 LTA DDX39B-AS1 HLA-B C6orf15 NFKBIL1 CCHCR1 HLA-C LOC100287329 MIR6891 MICB
esv2731791 Chr.6:30404802 - 31346410 on Build GRCh38 Deletion POU5F1 PSORS1C3 PSORS1C2 ABCF1 DDR1 MUC21 MUC22 MUCL3 HCG21 C6orf136 HLA-E IER3-AS1 MDC1-AS1 PSORS1C1 TUBB MRPS18B VARS2 GNL1 SFTA2 GTF2H4 IER3 TCF19 ATAT1 MIR877 LINC00243 HCG20 CDSN DHX16 LINC02569 LINC02570 LINC02571 NRM LOC105375012 HCG27 MDC1 HCG22 LOC124901299 C6orf15 PRR3 PPP1R10 CCHCR1 MIR4640 PPP1R18 HLA-C FLOT1
dgv1174e214 Chr.6:31139843 - 31176217 on Build GRCh38 Gain POU5F1 PSORS1C1 PSORS1C3 CCHCR1 TCF19
esv3608532 Chr.6:31163674 - 31304530 on Build GRCh38 Gain HCG27 POU5F1 PSORS1C3 LINC02571 HLA-C TCF19
dgv1175e214 Chr.6:31170668 - 31187842 on Build GRCh38 Gain POU5F1 PSORS1C3
nsv1074389 Chr.6:29116522 - 31446623 on Build GRCh38 Deletion TRIM10 PSORS1C3 SNORD32B MUC21 OR2I1 HCG21 HLA-E IER3-AS1 TUBB HLA-H HLA-J HCP5B HLA-F HCG20 LINC02569 LINC01015 OR11A1 HCG9 NRM IFITM4P LOC124901299 TRIM15 OR2H1 POLR1H OR12D2 ABCF1 MUC22 MICA-AS1 OR2H2 TRIM26 MDC1-AS1 MICA SFTA2 GTF2H4 IER3 RNF39 ATAT1 MIR877 LINC00243 TRIM40 CDSN DHX16 TRIM31 TRIM31-AS1 MAS1L LOC105375012 POLR1HASP HCG22 PRR3 CCHCR1 MOG MIR6891 POU5F1 PSORS1C2 HLA-G HCG17 MUCL3 HLA-V LINC01149 MRPS18B OR5V1 HLA-L RPP21 LINC02570 HCG27 LINC03003 HLA-B PPP1R10 MIR4640 PPP1R18 TRIM39 FLOT1 OR2J2 OR12D3 DDR1 HLA-A LINC02829 C6orf136 OR10C1 HLA-K PSORS1C1 HCG18 VARS2 GNL1 OR14J1 HLA-F-AS1 TCF19 OR12D1 GABBR1 TRIM39-RPP21 HCG4B LINC02571 ZFP57 MDC1 PPP1R11 C6orf15 HLA-C UBD HCG4
dgv1019n145 Chr.6:29873402 - 32666862 on Build GRCh38 Deletion TRIM10 SNHG32 SNORD117 PSORS1C3 C6orf47 MUC21 LTB TNF HLA-DQB1-AS1 HCG21 HLA-E MCCD1 IER3-AS1 LY6G6C LY6G6D TUBB C4A NOTCH4 AGER LY6G6F HSPA1L HLA-H PRRC2A HLA-J HCP5B NEU1 DXO BTNL2 C4B HCG20 HCP5 LINC02569 HCG9 LY6G6E NRM EHMT2-AS1 SAPCD1 LOC124901299 TNXA TRIM15 APOM POLR1H BAG6 CFB GPANK1 LY6G5B ABCF1 MUC22 MICA-AS1 HLA-DRB5 VARS1 LST1 FKBPL CYP21A1P TRIM26 MDC1-AS1 TNXB HSPA1A MICA SFTA2 GTF2H4 IER3 RNF39 LSM2 ATAT1 MIR877 C2 SNORD48 LINC00243 TRIM40 CDSN DHX16 TRIM31 HLA-DQA1 PRRT1 MIR6721 GPSM3 TRIM31-AS1 ZBTB12 LOC105375012 MSH5-SAPCD1 NCR3 AIF1 POLR1HASP HCG22 HLA-DRB1 PRR3 CCHCR1 TSBP1 MIR1236 LOC100287329 MIR6891 WHR1 POU5F1 PSORS1C2 SNORA38 HCG17 MUCL3 ATP6V1G2-DDX39B LINC01149 SKIC2 MRPS18B MPIG6B ABHD16A CSNK2B HLA-L RPP21 C2-AS1 MICB-DT LINC02570 MIR6833 NELFE HCG26 SAPCD1-AS1 HCG27 LY6G6F-LY6G6D HLA-DRA DDX39B-AS1 HLA-B PPP1R10 DDAH2 RNF5 MIR4640 PPP1R18 TRIM39 FLOT1 MICB LOC100507547 CYP21A2 MIR4646 PBX2 DDR1 ATP6V1G2 HLA-A SNORD52 DDX39B MIR6832 C6orf136 VWA7 HLA-K LY6G5C CLIC1 TSBP1-AS1 PSORS1C1 HCG18 HCG23 EHMT2 VARS2 GNL1 PPT2 TCF19 HLA-DRB6 SNORD84 TRIM39-RPP21 ATF6B HCG4B LINC02571 EGFL8 HLA-DQB1 PPT2-EGFL8 LTA AGPAT1 MDC1 HSPA1B PPP1R11 C6orf15 NFKBIL1 HLA-C SLC44A4 MSH5
nsv601481 Chr.6:30454855 - 31316476 on Build GRCh38 Loss POU5F1 PSORS1C3 PSORS1C2 ABCF1 DDR1 MUC21 MUC22 MUCL3 HCG21 C6orf136 HLA-E IER3-AS1 MDC1-AS1 PSORS1C1 TUBB MRPS18B VARS2 GNL1 SFTA2 GTF2H4 IER3 TCF19 ATAT1 MIR877 LINC00243 HCG20 CDSN DHX16 LINC02569 LINC02570 LINC02571 NRM LOC105375012 HCG27 MDC1 HCG22 LOC124901299 C6orf15 PRR3 PPP1R10 CCHCR1 MIR4640 PPP1R18 HLA-C FLOT1
nsv1122126 Chr.6:28628023 - 31244023 on Build GRCh38 Deletion TRIM10 PSORS1C3 SNORD32B MUC21 TRIM27 OR2I1 HCG21 HLA-E IER3-AS1 TUBB ZNF311 HLA-H OR2J3 HLA-J HCP5B HLA-F HCG20 LINC02569 LINC01015 OR11A1 HCG9 NRM OR2W1-AS1 IFITM4P LINC01556 LOC124901299 TRIM15 OR2H1 POLR1H OR12D2 ABCF1 MUC22 OR2H2 TRIM26 MDC1-AS1 SFTA2 GTF2H4 IER3 RNF39 ATAT1 MIR877 LINC00243 TRIM40 CDSN DHX16 TRIM31 TRIM31-AS1 MAS1L LOC105375012 POLR1HASP HCG22 PRR3 CCHCR1 MOG LINC00533 POU5F1 PSORS1C2 HLA-G HCG17 MUCL3 HLA-V HCG14 MRPS18B OR2W1 HCG15 OR5V1 HLA-L RPP21 LINC02570 HCG27 LINC03003 OR2B3 PPP1R10 MIR4640 PPP1R18 TRIM39 FLOT1 OR2J2 OR12D3 DDR1 HLA-A LINC02829 C6orf136 OR10C1 HLA-K PSORS1C1 HCG18 VARS2 GNL1 OR14J1 HLA-F-AS1 TCF19 OR12D1 GABBR1 TRIM39-RPP21 HCG4B LINC01623 ZFP57 MDC1 PPP1R11 OR2J1 C6orf15 UBD HCG4
nsv1144137 Chr.6:29720323 - 31338123 on Build GRCh38 Deletion TRIM10 POU5F1 PSORS1C3 PSORS1C2 MUC21 HLA-G HCG17 MUCL3 HCG21 HLA-E HLA-V IER3-AS1 TUBB MRPS18B HLA-H HLA-J HCP5B HLA-F HLA-L HCG20 RPP21 LINC02569 LINC02570 HCG9 NRM IFITM4P HCG27 LOC124901299 PPP1R10 MIR4640 TRIM15 PPP1R18 TRIM39 POLR1H FLOT1 ABCF1 DDR1 MUC22 HLA-A C6orf136 TRIM26 HLA-K MDC1-AS1 PSORS1C1 HCG18 VARS2 GNL1 SFTA2 GTF2H4 IER3 RNF39 HLA-F-AS1 TCF19 ATAT1 MIR877 TRIM39-RPP21 LINC00243 TRIM40 CDSN DHX16 TRIM31 HCG4B LINC02571 TRIM31-AS1 LOC105375012 MDC1 PPP1R11 POLR1HASP HCG22 C6orf15 PRR3 CCHCR1 HLA-C HCG4
nsv601264 Chr.6:29883666 - 31320716 on Build GRCh38 Loss TRIM10 POU5F1 PSORS1C3 PSORS1C2 MUC21 HCG17 MUCL3 HCG21 HLA-E IER3-AS1 TUBB MRPS18B HLA-H HLA-J HLA-L HCG20 RPP21 LINC02569 LINC02570 HCG9 NRM HCG27 LOC124901299 PPP1R10 MIR4640 TRIM15 PPP1R18 TRIM39 POLR1H FLOT1 ABCF1 DDR1 MUC22 HLA-A C6orf136 TRIM26 HLA-K MDC1-AS1 PSORS1C1 HCG18 VARS2 GNL1 SFTA2 GTF2H4 IER3 RNF39 TCF19 ATAT1 MIR877 TRIM39-RPP21 LINC00243 TRIM40 CDSN DHX16 TRIM31 HCG4B LINC02571 TRIM31-AS1 LOC105375012 MDC1 PPP1R11 POLR1HASP HCG22 C6orf15 PRR3 CCHCR1 HLA-C
esv32635 Chr.6:31173727 - 31282841 on Build GRCh38 Gain+Loss HCG27 PSORS1C3 HLA-C
esv3411275 Chr.6:29981607 - 31490616 on Build GRCh38 Duplication TRIM10 POU5F1 PSORS1C3 PSORS1C2 MUC21 HCG17 MUCL3 HCG21 HLA-E LINC01149 IER3-AS1 TUBB MRPS18B HLA-J HLA-L HCG20 RPP21 HCP5 LINC02569 MICB-DT LINC02570 NRM HCG26 HCG27 HLA-B LOC124901299 PPP1R10 MIR4640 TRIM15 PPP1R18 TRIM39 POLR1H FLOT1 ABCF1 DDR1 MUC22 MICA-AS1 C6orf136 TRIM26 MDC1-AS1 PSORS1C1 HCG18 VARS2 GNL1 MICA SFTA2 GTF2H4 IER3 RNF39 TCF19 ATAT1 MIR877 TRIM39-RPP21 LINC00243 TRIM40 CDSN DHX16 TRIM31 LINC02571 TRIM31-AS1 LOC105375012 MDC1 PPP1R11 POLR1HASP HCG22 C6orf15 PRR3 CCHCR1 HLA-C MIR6891
nsv5460471 Chr.6:31119831 - 31186318 on Build GRCh38 Duplication CDSN POU5F1 PSORS1C1 PSORS1C3 PSORS1C2 CCHCR1 TCF19

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More Information


Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

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