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          • Home
          • › Search Tool
          • › Search Results
          • › Hs04045819_cn
          See other TCF15 CNV Assays ›
          Gene Symbol
          TCF15
          Assay Reference Genome
          Location

          Chr.20:607617 on build GRCh38
          Cytoband
          Assay ID Hs04045819_cn
          Size
          Availability Made To Order
          Catalog # 4400291
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Target Gene Details

          Entrez Gene ID:

          6939

          Gene Name:

          transcription factor 15

          Gene Aliases:

          EC2, PARAXIS, bHLHa40

          Location:

          Chr.20:604257-610309 on Build GRCh38

          Assay Gene Location:

          Within Intron 1
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          TCF15 NM_004609.4 NP_004600.3
          AI218364.1
          AW290965.1
          BC067836.1 AAH67836.1
          U08336.1 AAA19969.1

          Target Copy Number Variation Details

          DGV Version:

          Release date: 2025-12-01, GRCh GRCh38
          Target
          Variation
          Location CNV
          Subtype
          Genes
          dgv7422n54 Chr.20:606311 - 613017 on Build GRCh38 Loss TCF15
          nsv585173 Chr.20:592392 - 625245 on Build GRCh38 Loss TCF15
          nsv469833 Chr.20:447851 - 614798 on Build GRCh38 Gain TBC1D20 CSNK2A1 TCF15
          nsv6516354 Chr.20:318748 - 687991 on Build GRCh38 Duplication NRSN2-AS1 RPL7AP14 SRXN1 SOX12 TBC1D20 RBCK1 SCRT2 CSNK2A1 LOC101929937 TRIB3 NRSN2 TCF15
          esv3644952 Chr.20:386013 - 1119183 on Build GRCh38 Gain LOC105372493 PSMF1 TBC1D20 SRXN1 ANGPT4 RSPO4 RBCK1 FAM110A SCRT2 CSNK2A1 TRIB3 SLC52A3 TCF15
          nsv458845 Chr.20:602943 - 625293 on Build GRCh38 Loss TCF15
          nsv833891 Chr.20:468248 - 620062 on Build GRCh38 Gain+Loss CSNK2A1 TCF15
          nsv4532730 Chr.20:492354 - 967357 on Build GRCh38 Duplication SRXN1 ANGPT4 RSPO4 FAM110A SCRT2 CSNK2A1 SLC52A3 TCF15
          nsv458844 Chr.20:599013 - 614136 on Build GRCh38 Loss TCF15
          nsv828661 Chr.20:606973 - 612340 on Build GRCh38 Gain TCF15
          nsv585172 Chr.20:551334 - 613017 on Build GRCh38 Gain TCF15
          nsv6521737 Chr.20:596427 - 614460 on Build GRCh38 Duplication TCF15

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          More Information


          Set Membership:

          Intragenic Intronic Non-exonic DGV Variation

          Gene Ontology Categories:

          Function(s) Process(es)

          somitogenesis
          respiratory system process
          regulation of transcription from RNA polymerase II promoter
          mesoderm development
          muscle organ development
          anterior/posterior pattern specification
          regulation of gene expression
          stem cell population maintenance
          cell differentiation
          developmental process
          post-anal tail morphogenesis
          ear development
          establishment of epithelial cell apical/basal polarity
          positive regulation of transcription from RNA polymerase II promoter
          paraxial mesoderm development
          muscle organ morphogenesis
          skeletal system morphogenesis
          neuromuscular process controlling posture
          mesenchymal to epithelial transition
          negative regulation of hematopoietic stem cell differentiation
          regulation of extracellular matrix organization
          positive regulation of stem cell differentiation
          RNA polymerase II regulatory region sequence-specific DNA binding
          RNA polymerase II core promoter proximal region sequence-specific DNA binding
          RNA polymerase II transcription factor activity, sequence-specific DNA binding
          transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
          DNA binding
          transcription factor activity, sequence-specific DNA binding
          bHLH transcription factor binding
          protein dimerization activity
          E-box binding

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