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- Gene Symbol
- CYP2D6
- Assay Reference Genome
Location
Chr.22:42129681 on build GRCh38- Cytoband
Genomic Map
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Target Gene Details
Entrez Gene ID: | 1565 |
Gene Name: | cytochrome P450 family 2 subfamily D member 6 (gene/pseudogene) |
Gene Aliases: |
CPD6, CYP2D, CYP2D7AP, CYP2D7BP, CYP2D7P2, CYP2D8P2, CYP2DL1, CYPIID6, P450-DB1, P450C2D, P450DB1 |
Location: |
Chr.22:48826-53137 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| CYP2D6 | NM_000106.6 | NP_000097.3 | ||
| NM_001025161.3 | NP_001020332.2 | |||
| AK309600.1 | ||||
| AY663390.1 | AAU87043.1 | |||
| BC066877.1 | AAH66877.1 | |||
| BC067432.1 | AAH67432.1 | |||
| BC075023.2 | AAH75023.1 | |||
| BC075024.2 | AAH75024.1 | |||
| BC106757.1 | AAI06758.1 | |||
| BC106758.1 | AAI06759.1 | |||
| BC126858.1 | AAI26859.1 | |||
| BX422592.2 | ||||
| CR456430.1 | CAG30316.1 | |||
| M20403.1 | AAA52153.1 | |||
| X07618.1 | ||||
| X08006.1 | CAA30807.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2025-12-01, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv1319e212 | Chr.22:42126516 - 42145482 on Build GRCh38 | Gain |
 CYP2D6
CYP2D7
|
| esv6632 | Chr.22:42125966 - 42139888 on Build GRCh38 | Loss |
CYP2D6
CYP2D7
|
| nsv6048521 | Chr.22:42125965 - 42135344 on Build GRCh38 | Deletion |
CYP2D6
|
| esv3568417 | Chr.22:42126951 - 42144107 on Build GRCh38 | Loss |
CYP2D6
CYP2D7
|
| nsv3541963 | Chr.22:42128465 - 42143954 on Build GRCh38 | Duplication |
CYP2D6
CYP2D7
|
| nsv834210 | Chr.22:42057329 - 42209100 on Build GRCh38 | Loss |
WBP2NL
CYP2D6
SMDT1
CYP2D7
PHETA2
SNORD13P1
TCF20
NDUFA6
NDUFA6-DT
NAGA
|
| nsv829243 | Chr.22:42121254 - 42154514 on Build GRCh38 | Loss |
CYP2D6
CYP2D7
NDUFA6-DT
|
| esv33893 | Chr.22:42126620 - 42142218 on Build GRCh38 | Gain+Loss |
CYP2D6
CYP2D7
|
| nsv436350 | Chr.22:42125831 - 42135447 on Build GRCh38 | Deletion |
CYP2D6
|
| nsv5954144 | Chr.22:42121553 - 42132728 on Build GRCh38 | Deletion |
CYP2D6
NDUFA6-DT
|
| nsv3641 | Chr.22:42099466 - 42146296 on Build GRCh38 | Deletion |
CYP2D6
CYP2D7
NDUFA6-DT
|
| dgv4710n223 | Chr.22:42125201 - 42135000 on Build GRCh38 | Duplication |
CYP2D6
NDUFA6-DT
|
| nsv955164 | Chr.22:42122897 - 42144299 on Build GRCh38 | Deletion |
CYP2D6
CYP2D7
NDUFA6-DT
|
| nsv5585870 | Chr.22:42125912 - 42138063 on Build GRCh38 | Deletion |
CYP2D6
|
| nsv498989 | Chr.22:42123210 - 42135371 on Build GRCh38 | Loss |
CYP2D6
NDUFA6-DT
|
| dgv4711n223 | Chr.22:42127556 - 42142900 on Build GRCh38 | Deletion |
CYP2D6
CYP2D7
|
| nsv6536737 | Chr.22:42128601 - 42139400 on Build GRCh38 | Duplication |
CYP2D6
|
| esv2171396 | Chr.22:42125911 - 42139869 on Build GRCh38 | Deletion |
CYP2D6
CYP2D7
|
| nsv6541771 | Chr.22:42125701 - 42129900 on Build GRCh38 | Duplication |
CYP2D6
|
| esv3575484 | Chr.22:42118886 - 42144107 on Build GRCh38 | Gain |
CYP2D6
CYP2D7
NDUFA6-DT
|
| nsv508737 | Chr.22:42052007 - 42134336 on Build GRCh38 | Insertion |
WBP2NL
CYP2D6
SMDT1
PHETA2
SNORD13P1
NDUFA6
NDUFA6-DT
NAGA
|
| nsv6552980 | Chr.22:42127201 - 42129800 on Build GRCh38 | Duplication |
CYP2D6
|
| nsv1110402 | Chr.22:42125795 - 42137591 on Build GRCh38 | Duplication |
CYP2D6
|
| nsv6535893 | Chr.22:41572303 - 44198988 on Build GRCh38 | Duplication |
CSDC2
EFCAB6-DT
CYP2D7
POLDIP3
PHETA2
XRCC6
SCUBE1-AS2
SCUBE1
EFCAB6-AS1
RRP7BP
SMDT1
PNPLA5
SREBF2-AS1
TCF20
SERHL2
BIK
C22orf46P
RNU12
SCUBE1-AS1
A4GALT
SAMM50
SULT4A1
PMM1
SNORD13P1
RRP7A
CYB5R3
SEPTIN3
MEI1
TSPO
WBP2NL
MIR378I
ATP5MGL
PARVG
DESI1
TTLL1-AS1
PARVB
MIR33A
MPPED1
LOC101927344
OGFRP1
EFCAB6
SMIM45
CYP2D6
ARFGAP3
LOC107985567
MCAT
SREBF2
NDUFA6
PACSIN2
TNFRSF13C
SHISA8
PNPLA3
NFAM1
TTLL12
LINC01639
LINC01315
SNU13
CCDC134
CENPM
TTLL1
SERHL
NDUFA6-DT
NAGA
|
| esv3647809 | Chr.22:42127947 - 42137882 on Build GRCh38 | Loss |
CYP2D6
|
| dgv733e201 | Chr.22:42128848 - 42143382 on Build GRCh38 | Deletion |
CYP2D6
CYP2D7
|
| nsv6052872 | Chr.22:42125962 - 42139826 on Build GRCh38 | Duplication |
CYP2D6
CYP2D7
|
| esv2724275 | Chr.22:42123193 - 42141302 on Build GRCh38 | Deletion |
CYP2D6
CYP2D7
NDUFA6-DT
|
| nsv3231826 | Chr.22:42118380 - 42147472 on Build GRCh38 | Insertion |
CYP2D6
CYP2D7
NDUFA6-DT
|
Back To TopMore Information
Important Information
Individuals may carry null alleles or extra copies of CYP2D6. Some CYP2D6 alleles contain sequences derived from the highly homologous CYP2D7 pseudogene. Hs04083572_cn specifically targets CYP2D6 intron 2 sequences and will not amplify CYP2D7 or CYP2D8 pseudogenes, but will amplify CYP2D6/CYP2D7 hybrid alleles carrying CYP2D6 intron 2 sequences (e.g. CYP2D6*36 contains conversion to CYP2D7 in exon 9). Note: rs186133763 underlies a primer sequence and can reduce target amplification when the minor allele is present.Additional Information:
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
Validated
|
Gene Ontology Categories:
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