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          • Home
          • › Search Tool
          • › Search Results
          • › Hs04441385_cn
          See other SCFD1 CNV Assays ›
          Gene Symbol
          SCFD1
          Assay Reference Genome
          Location

          Chr.14:30658105 on build GRCh38
          Cytoband
          14q12
          Assay ID Hs04441385_cn
          Size
          Availability Made To Order
          Catalog # 4400291
          Price
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          • Genomic Map
          • Assay Details
          • More Information

          Genomic Map

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          Assay Details

          Target Gene Details

          Entrez Gene ID:

          23256

          Gene Name:

          sec1 family domain containing 1

          Gene Aliases:

          C14orf163, RA410, SLY1, SLY1P, STXBP1L2

          Location:

          Chr.14:30622254-30735828 on Build GRCh38

          Assay Gene Location:

          Within Intron 10
          Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
          SCFD1 NM_001257376.1 NP_001244305.1
          NM_001283031.1 NP_001269960.1
          NM_001283032.1 NP_001269961.1
          NM_001283033.1 NP_001269962.1
          NM_016106.3 NP_057190.2
          NM_182835.2 NP_878255.1
          XM_005267469.2 XP_005267526.1
          XM_011536586.2 XP_011534888.1
          XM_011536587.2 XP_011534889.1
          XM_011536588.2 XP_011534890.1
          XM_011536589.1 XP_011534891.1
          XM_017021113.1 XP_016876602.1
          AB020724.2
          AF086916.1 AAP97146.1
          AF092139.1 AAD40381.1
          AF110646.1 AAD48586.1
          AF319958.1 AAG50273.1
          AK222820.1 BAD96540.1
          AK290410.1
          AK297873.1
          AK298622.1
          AK299222.1
          AK301406.1
          AK307960.1
          AK308587.1
          AK316212.1
          BC017734.1 AAH17734.1
          BX325898.2
          DN993082.1

          Target Copy Number Variation Details

          DGV Version:

          Release date: 2016-05-15, GRCh GRCh38
          Target
          Variation
          Location CNV
          Subtype
          Genes
          nsv564169 Chr.14:30349881 - 31072288 on Build GRCh38 Gain STRN3 SCFD1 G2E3 COCH AP4S1 LOC100506071 MIR624
          nsv564171 Chr.14:30598884 - 30680424 on Build GRCh38 Loss SCFD1 G2E3
          nsv526536 Chr.14:28322483 - 30669172 on Build GRCh38 Gain LOC105370424 SCFD1 LINC01551 G2E3 FOXG1-AS1 PRKD1 FOXG1
          esv33189 Chr.14:30331017 - 31442539 on Build GRCh38 Loss LOC101927124 HECTD1 STRN3 SCFD1 G2E3 COCH AP4S1 LOC100506071 MIR624 HEATR5A

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          More Information


          Set Membership:

          Intragenic Intronic Non-exonic DGV Variation

          Panther Classification:

          Molecular Function -

          membrane trafficking regulatory protein

          Gene Ontology Categories:

          Function(s) Process(es)

          cell morphogenesis
          response to hypoxia
          retrograde vesicle-mediated transport, Golgi to ER
          post-Golgi vesicle-mediated transport
          vesicle docking involved in exocytosis
          phagocytosis
          response to toxic substance
          protein transport
          COPII vesicle coating
          regulation of protein transport
          regulation of ER to Golgi vesicle-mediated transport
          toxin transport
          negative regulation of autophagosome assembly
          protein binding
          syntaxin binding
          protein N-terminus binding

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